Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 8e-14 >seq2 Length=194962 Score = 93.3 bits (102), Expect = 8e-14 Identities = 352/542 (65%), Gaps = 13/542 (2%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGC 42343 ||| || |||| || |||||| |||||||||||||| | || | ||| |||||| || Sbjct 12316 ATCAAGTACCACGAAATCTGGCAAATGTACAAGAAGGCTGAAGCT-TCCTTCTGGACTGC 12374 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGG---GAGTCACTGTCTGAGAACGA 42400 ||| || ||||| ||| || || || | |||| || | || | ||||| Sbjct 12375 CGAAGAAATTGATTTGGGTAAAGATACCCATGACTGGAACGAAAAATTGAACAACAACGA 12434 Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460 || | ||| | | || |||| ||||| || || |||||||| || || || || Sbjct 12435 AAGATACTTCATTTCCAGAATCTTGGCATTCTTTGCTGCTTCTGACGGTATTGTTAACGA 12494 Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGC--TGCTTCTAC 42518 ||| ||| | ||| || || || | || || || || ||||| Sbjct 12495 AAACTTGGTTGAAAACTTCTCTGCTGAAGTTCA--AATTCCAGAAGCCAAGTGTTTCTAT 12552 Query 42519 GGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACG 42578 || ||||| || || || ||| | |||||||| ||| | ||| || |||| Sbjct 12553 GGTTTCCAAATTATGATGGAAAACATCCACTCTGAAACCTACTCGTTACTTATCGACACC 12612 Query 42579 TACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGC 42638 |||||| |||||| || | || | ||||| || || || | || || || Sbjct 12613 TACATCAAGGATCCAAAGGAAGCTGACTTCTTATTCAATGCTATCGACAACATCCCTTGT 12672 Query 42639 ATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATC-GAGAGTCCCGACGCAACGTTCGG 42697 |||||||||||||| |||||||| | | |||||| | || | || || ||||| Sbjct 12673 ATCAAGAAGAAGGCTGACTGGGCTTTAAGATGGATCAGTGA-TGATGATGCTTTATTCGG 12731 Query 42698 CGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTC 42757 || || | || ||||| | || || || || ||||||||| || | || || || Sbjct 12732 TGAAAGATTAGTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTCAGTGGTTCATTTGCTTC 12791 Query 42758 CATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCA 42816 ||| |||||| | ||| ||| |||| | ||||| || | |||||||| || ||| | | Sbjct 12792 CATTTTCTGGTTAAAGAAGAGAGGT-TTAATGCCTGGTTTAACCTTCTCCAATGAATTAA 12850 Query 42817 TC 42818 || Sbjct 12851 TC 12852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944332825710400