Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 3e-12 >seq2 Length=194962 Score = 87.8 bits (96), Expect = 3e-12 Identities = 347/545 (64%), Gaps = 6/545 (1%) Strand=Plus/Minus Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 || || || ||| |||| || || ||||| | | | | || ||||| | || | | Sbjct 12866 CCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCAGGCATTAAACCTCTCTTC 12807 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 || | ||| ||||||| ||||| | ||| || || ||||| || || || || || || Sbjct 12806 TTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATACCTTCAACAGCAGCGAAG 12747 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || || | || ||||| || | || | ||| | |||| ||| ||||| ||| Sbjct 12746 GCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGATCCATCTTAAAGCCCAGTCA 12687 Query 160124 GCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTC 160183 |||||||| ||| || || ||| |||| || || || || ||| ||||| Sbjct 12686 GCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAATAAGAAGTCAGCTTCCTTT 12627 Query 160184 ACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATG 160243 ||||||||| || | || || |||||| |||| | ||| | ||||| || Sbjct 12626 GGATCCTTGATGTAGGTGTCGATAAGTAACGAGTAGGTTTCAGAGTGGATGTTTTCCATC 12567 Query 160244 GCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTT 160303 || || || |||||| | | || || || || || || | ||| || Sbjct 12566 ATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTGAACTTCAGCAGAGAAGTTT 12507 Query 160304 TGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAG 160363 | | ||| || | ||||| | ||||| | || |||||||| ||||| | || Sbjct 12506 TCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAAGAATGCCAAGATTCTGGAA 12447 Query 160364 ATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAG---TGTGTCACGTCTTGGGCC 160420 ||||| | ||| |||| ||||| | | | | | |||| || || |||| || Sbjct 12446 ATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGTCATGGGT---ATCTTTACCC 12390 Query 160421 AAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGATG 160480 ||||||| ||||| || |||| || ||| | ||| | |||||||| |||||| Sbjct 12389 AAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTGTACATTTGCCAGATT 12330 Query 160481 GCGTG 160485 |||| Sbjct 12329 TCGTG 12325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795149832702400