Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq133 246 2e-60
seq2 178 7e-40
>seq133
Length=29429
Score = 246 bits (272), Expect = 2e-60
Identities = 448/642 (70%), Gaps = 19/642 (3%)
Strand=Plus/Plus
Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984
||| |||||||||||||||| || ||||| | ||||||| |||||||| ||||||||
Sbjct 24359 ACTCTCTCCATAAATAAATCAGGTATCCATAACCCATAAAACAAATCTCTTGCTCTCATC 24418
Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044
||||| || || ||||| ||||||| |||||| | | | || || |||||||||||
Sbjct 24419 TCTTCCTTCCCATGATTTTTTTTTAAATCTAATACACTTATGATGTCACAGTGCCATGGT 24478
Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCA 26104
|| | ||| || || || || |||||| || |||||||| || ||||| ||
Sbjct 24479 TCAATATAAATGGCGAATGCTCCGGGTCTTTTATTACCTCCTTGATCAACATATCTCGCT 24538
Query 26105 GTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGA 26164
|| | || ||||| ||||||| || ||||| ||| ||||| ||| || | ||| |
Sbjct 24539 GTGTTGTTAAAAACCCTCAACATAGGCACTAAGCCACTTGAAGTTCCATTAGAACTAGAA 24598
Query 26165 ATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTT 26224
|| | ||||| | |||||||| || |||| | || ||||| |||| |||
Sbjct 24599 ATATATGATCCACTTCCTCTAATATTATGTACATGTAGCCCAATTCCTCCAGATGCTTTA 24658
Query 26225 GAAATAGCTGCACA-ATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283
||||| |||| | | || || ||| | | |||| || | ||| ||| ||| |||
Sbjct 24659 GAAATTAATGCAGACTTATGTAA-TGTTTTGTAAATACCGTCTATTGAGTCATCTTCCAT 24717
Query 26284 TCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTT---GTTCCTGAATTAAATAATGT 26340
| | |||||||||||||||||| | ||| | | ||||||||||||||||||||
Sbjct 24718 GGCAAGTAAAAAACAAGAAGATAAAT---AATTATATTCAGTTCCTGAATTAAATAATGT 24774
Query 26341 CGGTGTAGCATGAGTATAATA-TCCTTC-ACTCAAAGCTGTATAAGTTTCAAGAACTTCA 26398
||||| ||||| | |||| | |||| || || | ||||||||| | ||| |
Sbjct 24775 CGGTGATGCATGTATGAAATACTTCTTCGACATTAA--TTCATAAGTTTCTATAACACTA 24832
Query 26399 TCGATATTGTAATTACTAACTTCAATAGCTGTTCTTAACCACATATATTGAGGTCGTTCA 26458
|| |||| | | | || | || || |||||| ||||| | |||||| ||||
Sbjct 24833 TCAATATCATTACCATGAATGCCTATGGCAACTCTTAAAAACATAAACTGAGGTGTTTCA 24892
Query 26459 ATTACATTATTTTCCGCATCTCTAATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAA 26518
| ||| || || || || ||| |||||| || |||| ||| ||||| | ||||||
Sbjct 24893 CTAACAACATCATC--CAACTTTAA-CAAATATGAATTTTGTAATGTTTTAATCCCAAAA 24949
Query 26519 TA-ATCATGATT-GAAATCTCTTTTTTGTACTATAATTGAAT 26558
|| ||| ||| ||| |||||||| ||||||| ||||
Sbjct 24950 TATGTCA--ATTCGAAGTCTCTTTTGCTATCTATAATCGAAT 24989
>seq2
Length=194962
Score = 178 bits (196), Expect = 7e-40
Identities = 331/481 (69%), Gaps = 4/481 (1%)
Strand=Plus/Minus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
||||||| |||||||| ||| ||| |||||||||| ||| ||| ||| |||||||| ||
Sbjct 127518 ATTTGGAGAGAATAAAGTCCAGTCACCATTTTGCTCGACTCTCTTCATGAATAAATCAGG 127459
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||| | ||| ||||||||||| ||||| |||||||| || || ||||||||| |
Sbjct 127458 AATCCATAAGGCAGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCATGATTCTTTCT 127399
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
| ||||| |||||| || ||||| | |||||||| ||||| || | ||||| |||
Sbjct 127398 GATATCTATGAAATCGAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAAAGGCACC 127339
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
| ||| || ||||||||||| || || | ||||| | || ||||| | |||
Sbjct 127338 TGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACACGAACCAT 127279
Query 26128 TGGAACTAATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
|| | | || | ||| ||| || || || | | || | | || || || | ||
Sbjct 127278 AGGGA-TGATACCGTTAGAAGTACCATTGGTACCAGCTATGTAAGCACCAGTAGAACGAA 127220
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAA 26245
| | ||| ||| | ||| || |||||||| | || ||||| ||||| ||| |
Sbjct 127219 TGTTGTGGATATGTAAACCTATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCA 127160
Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305
| |||||| | || || | || ||| | ||||| | | || |||||||| ||
Sbjct 127159 A-GGTATCGTAGATACCATCAATAGAGTCATCCTTCATAGCAACCAAGAAACAAGACGAC 127101
Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCT 26365
| ||| | | || || || | |||||| || || || | | | || || || ||| |
Sbjct 127100 ATTTGAGGACTAGGAGTACCAGCATTAAACAACGTTGGAGAACCGTGTGTGAAAAATCTT 127041
Query 26366 T 26366
|
Sbjct 127040 T 127040
Score = 107 bits (118), Expect = 1e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
||||| |||| |||||||||||| | | |||||||| |||| || |||||||||
Sbjct 128366 AATTCACCAGCCAAAACTCTTCTGGAGTAAATATTTGAAGTATATGGCTCGAAACATTCA 128307
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
|| | ||||| |||||||| || || || ||||||||| || | ||| | ||||||
Sbjct 128306 TTGTAACCTAATATTTGAGAGGTTGAGGCAGTTGGCATTGGAGCAACTAACAAAGAATTT 128247
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179
|| | ||||| ||| | | || |||||| || ||||||| ||
Sbjct 128246 CTAATACCATGCTTAGCTAACTTTTGTTTCAAAGTATCCCAGTC 128203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038334680500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |