Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq2 242 5e-59 seq32 138 2e-27 >seq2 Length=194962 Score = 242 bits (268), Expect = 5e-59 Identities = 572/857 (67%), Gaps = 26/857 (3%) Strand=Plus/Minus Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920 || |||| ||| || | ||| | || ||||||||||| |||||||| | || || || Sbjct 13181 GCCTTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATG 13122 Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTAT 17980 | |||||| || ||||| || || || ||| ||||| | ||| | Sbjct 13121 TTTTCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACTTTTTTGTTACCTAAGGCAACC 13062 Query 17981 AATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGT 18040 ||||||||||| || || ||||| || ||||| |||| || | || |||||||||| | Sbjct 13061 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 13002 Query 18041 AGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATT 18100 | | || |||| ||| ||||| | |||||| || || || ||| | || | || Sbjct 13001 AATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATA 12942 Query 18101 ATGTTTATTACCCTAG----ATTTTGGCAATTTATTAATTATGTGATTATAATATAATAA 18156 || || || || || | | | ||| ||| | | || |||| || Sbjct 12941 ATTCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGA-------ATAACAA 12889 Query 18157 ACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAA 18216 ||| || ||||||||||||||||||||||| | | |||||||| || || ||||| Sbjct 12888 ACATGCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAA 12829 Query 18217 CCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAA 18276 || ||||||| |||||| || |||| ||| || || || || || || | ||||| Sbjct 12828 ACCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAA 12769 Query 18277 TATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGC-AAAACTGTATTTATTGCTC 18334 ||||| ||||| ||| ||||| || | |||||||||| | || | | | | | || Sbjct 12768 GATACCTTCAACAGCA-GCGAAGGCAACTAATCTTTCACCGAATAAAGCA--TCATCATC 12712 Query 18335 AGT-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGC 18393 | | |||||| || ||||| || | | ||||| || || | || ||||| Sbjct 12711 ACTGATCCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGC 12652 Query 18394 ATT---AAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450 ||| || || ||| | || |||||| ||| || || || |||||||| | || || Sbjct 12651 ATTGAATAAGAAGTCAGC--TTCCTTTGG-ATCCTTGATGTAGGTGTCGATAAGTAACGA 12595 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510 || ||||||| || ||| ||||||| || || |||| ||| || | | || || Sbjct 12594 GTAGGTTTCAGAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTC 12535 Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 ||| ||||| || | | || |||| ||||| || || ||||| |||||||||| Sbjct 12534 TGGAATTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGA 12475 Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATT--- 18627 || || || |||||||| | |||||| | | |||| || | || | || Sbjct 12474 AGCAGCAAAGAATGCCAAGATTCTGGAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTC 12415 Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTC 18687 |||||| |||| ||||||| | ||||| |||||| | ||||| || || | ||| Sbjct 12414 GTTCCAGTCATGGGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTC 12355 Query 18688 GGCCTGTTTGTACATTT 18704 |||| |||||||||| Sbjct 12354 AGCCTTCTTGTACATTT 12338 >seq32 Length=83674 Score = 138 bits (152), Expect = 2e-27 Identities = 172/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 ||||||||||| || | || || || ||||| || || ||||| |||||||| ||| | Sbjct 19625 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 19684 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | |||| ||||| || ||| || ||||| || ||||| || || || || Sbjct 19685 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 19744 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||||||||| || | || |||||||| | |||||| ||||| ||||| ||||| Sbjct 19745 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 19804 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | ||||||| || | || | || || || |||||||||||||| |||| Sbjct 19805 A--ACATCCAAAAGGAATCCACCTTACACTTGGTCTTAAGATTAAGAGGTGGTG 19856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731867059864000