Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq2 242 5e-59
seq32 138 2e-27
>seq2
Length=194962
Score = 242 bits (268), Expect = 5e-59
Identities = 572/857 (67%), Gaps = 26/857 (3%)
Strand=Plus/Minus
Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920
|| |||| ||| || | ||| | || ||||||||||| |||||||| | || || ||
Sbjct 13181 GCCTTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATG 13122
Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTAT 17980
| |||||| || ||||| || || || ||| ||||| | ||| |
Sbjct 13121 TTTTCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACTTTTTTGTTACCTAAGGCAACC 13062
Query 17981 AATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGT 18040
||||||||||| || || ||||| || ||||| |||| || | || |||||||||| |
Sbjct 13061 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 13002
Query 18041 AGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATT 18100
| | || |||| ||| ||||| | |||||| || || || ||| | || | ||
Sbjct 13001 AATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATA 12942
Query 18101 ATGTTTATTACCCTAG----ATTTTGGCAATTTATTAATTATGTGATTATAATATAATAA 18156
|| || || || || | | | ||| ||| | | || |||| ||
Sbjct 12941 ATTCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGA-------ATAACAA 12889
Query 18157 ACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAA 18216
||| || ||||||||||||||||||||||| | | |||||||| || || |||||
Sbjct 12888 ACATGCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAA 12829
Query 18217 CCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAA 18276
|| ||||||| |||||| || |||| ||| || || || || || || | |||||
Sbjct 12828 ACCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAA 12769
Query 18277 TATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGC-AAAACTGTATTTATTGCTC 18334
||||| ||||| ||| ||||| || | |||||||||| | || | | | | | ||
Sbjct 12768 GATACCTTCAACAGCA-GCGAAGGCAACTAATCTTTCACCGAATAAAGCA--TCATCATC 12712
Query 18335 AGT-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGC 18393
| | |||||| || ||||| || | | ||||| || || | || |||||
Sbjct 12711 ACTGATCCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGC 12652
Query 18394 ATT---AAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450
||| || || ||| | || |||||| ||| || || || |||||||| | || ||
Sbjct 12651 ATTGAATAAGAAGTCAGC--TTCCTTTGG-ATCCTTGATGTAGGTGTCGATAAGTAACGA 12595
Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510
|| ||||||| || ||| ||||||| || || |||| ||| || | | || ||
Sbjct 12594 GTAGGTTTCAGAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTC 12535
Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570
||| ||||| || | | || |||| ||||| || || ||||| ||||||||||
Sbjct 12534 TGGAATTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGA 12475
Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATT--- 18627
|| || || |||||||| | |||||| | | |||| || | || | ||
Sbjct 12474 AGCAGCAAAGAATGCCAAGATTCTGGAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTC 12415
Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTC 18687
|||||| |||| ||||||| | ||||| |||||| | ||||| || || | |||
Sbjct 12414 GTTCCAGTCATGGGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTC 12355
Query 18688 GGCCTGTTTGTACATTT 18704
|||| ||||||||||
Sbjct 12354 AGCCTTCTTGTACATTT 12338
>seq32
Length=83674
Score = 138 bits (152), Expect = 2e-27
Identities = 172/234 (74%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| || | || || || ||||| || || ||||| |||||||| ||| |
Sbjct 19625 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 19684
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | |||| ||||| || ||| || ||||| || ||||| || || || ||
Sbjct 19685 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 19744
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
||||||||||| || | || |||||||| | |||||| ||||| ||||| |||||
Sbjct 19745 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 19804
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || | || || || |||||||||||||| ||||
Sbjct 19805 A--ACATCCAAAAGGAATCCACCTTACACTTGGTCTTAAGATTAAGAGGTGGTG 19856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731867059864000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |