Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq32 165 2e-35 seq2 158 2e-33 >seq32 Length=83674 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | ||| || || ||||| || | || || ||| || |||||||| Sbjct 19855 ACCACCTCTTAATCTTAAGACCAAGTGTAAGGTGGATTCCTTTTGGATGTTGTAATCAGA 19796 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| |||| || ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct 19795 TAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGG 19736 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || ||| || || || |||| ||||| ||||| || Sbjct 19735 AATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAAC 19676 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| |||||||| ||||||||||| || || | || || |||||||| Sbjct 19675 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 19625 >seq2 Length=194962 Score = 158 bits (174), Expect = 2e-33 Identities = 292/425 (69%), Gaps = 9/425 (2%) Strand=Plus/Minus Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706 ||||||||||| || || |||||||| ||||| ||||||| | ||| |||||||| ||| Sbjct 13061 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 13002 Query 49707 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagctt--gt-tta 49763 ||| | |||||| || ||| | |||||| ||||| || || |||| || || Sbjct 13001 AATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATA 12942 Query 49764 attatcataattatattattttttgataatttatatttaatatgattcgcatatattaaA 49823 ||| | || ||| | | || | | ||| || | | | ||| ||| Sbjct 12941 ATTCTTTCAACAATAACAGCATCTG-----GTCTGTTTTGTAAG-TGGGAGAATAACAAA 12888 Query 49824 CATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 49883 ||||| |||||||| |||||||| || || | | | || |||||||| || ||||| Sbjct 12887 CATGCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAA 12828 Query 49884 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 49943 || |||||||| |||||||| || | ||| || || || ||||| || | ||||| Sbjct 12827 CCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAG 12768 Query 49944 ATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAT 50003 ||||| || ||| || || || | || |||| | || || | | |||||| Sbjct 12767 ATACCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTG 12708 Query 50004 ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 50063 ||||| ||| |||||| || || || || |||||| |||| || || || ||||| || Sbjct 12707 ATCCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTG 12648 Query 50064 AATAA 50068 ||||| Sbjct 12647 AATAA 12643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984473188629000