Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq32 165 2e-35
seq2 158 2e-33
>seq32
Length=83674
Score = 165 bits (182), Expect = 2e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | ||| || || ||||| || | || || ||| || ||||||||
Sbjct 19855 ACCACCTCTTAATCTTAAGACCAAGTGTAAGGTGGATTCCTTTTGGATGTTGTAATCAGA 19796
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| |||| || ||||| |||||||| ||||||||||| ||||| ||||||||
Sbjct 19795 TAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGG 19736
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || ||| || || || |||| ||||| ||||| ||
Sbjct 19735 AATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAAC 19676
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||||| |||||||| ||||||||||| || || | || || ||||||||
Sbjct 19675 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 19625
>seq2
Length=194962
Score = 158 bits (174), Expect = 2e-33
Identities = 292/425 (69%), Gaps = 9/425 (2%)
Strand=Plus/Minus
Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706
||||||||||| || || |||||||| ||||| ||||||| | ||| |||||||| |||
Sbjct 13061 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 13002
Query 49707 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagctt--gt-tta 49763
||| | |||||| || ||| | |||||| ||||| || || |||| || ||
Sbjct 13001 AATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATA 12942
Query 49764 attatcataattatattattttttgataatttatatttaatatgattcgcatatattaaA 49823
||| | || ||| | | || | | ||| || | | | ||| |||
Sbjct 12941 ATTCTTTCAACAATAACAGCATCTG-----GTCTGTTTTGTAAG-TGGGAGAATAACAAA 12888
Query 49824 CATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 49883
||||| |||||||| |||||||| || || | | | || |||||||| || |||||
Sbjct 12887 CATGCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAA 12828
Query 49884 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 49943
|| |||||||| |||||||| || | ||| || || || ||||| || | |||||
Sbjct 12827 CCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAG 12768
Query 49944 ATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAT 50003
||||| || ||| || || || | || |||| | || || | | ||||||
Sbjct 12767 ATACCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTG 12708
Query 50004 ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 50063
||||| ||| |||||| || || || || |||||| |||| || || || ||||| ||
Sbjct 12707 ATCCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTG 12648
Query 50064 AATAA 50068
|||||
Sbjct 12647 AATAA 12643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984473188629000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |