Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq2 179 7e-40 seq32 161 2e-34 >seq2 Length=194962 Score = 179 bits (198), Expect = 7e-40 Identities = 372/546 (68%), Gaps = 17/546 (3%) Strand=Plus/Minus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| ||| |||| | |||||||| || || || ||||| |||| || || Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119 Query 38892 TTCATAAAATCAAATGGATTTTTGGTA---TTATAATATTTTTCTCCTATC-AATACATA 38947 | |||||| || ||||| || |||| || ||| ||||| | || | || || Sbjct 13118 TCCATAAAGTCGAATGGGTT---GGTAACGTTGTAAACTTTTT-TGTTACCTAAGGCAAC 13063 Query 38948 TAATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAA 39007 ||||||||||| || || |||||||| ||||| ||||||| | ||| |||||||| || Sbjct 13062 CAATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAA 13003 Query 39008 TAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagctt--gtt-t 39064 |||| | |||||| || ||| | |||||| ||||| || || |||| || | Sbjct 13002 TAATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGAT 12943 Query 39065 aattatcataattatattattttttgataatttatatttaatatgattcgcatataGTAA 39124 |||| | || ||| | | || | | ||| || | | | ||| || Sbjct 12942 AATTCTTTCAACAATAACAGCATCTGGTC-----TGTTTTGTAAG-TGGGAGAATAACAA 12889 Query 39125 ACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAA 39184 |||||| ||||| || ||||||||||| || | | | || |||||||| || ||||| Sbjct 12888 ACATGCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAA 12829 Query 39185 TCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAA 39244 || |||||||| |||||||| || | ||| || || || ||||| || | ||||| Sbjct 12828 ACCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAA 12769 Query 39245 TATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAA 39304 ||||| || ||| || || || | || |||| | || || | | |||||| Sbjct 12768 GATACCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACT 12709 Query 39305 AATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTT 39364 ||||| ||| ||||| || || || || |||||| |||| || || || ||||| || Sbjct 12708 GATCCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATT 12649 Query 39365 AAATAA 39370 ||||| Sbjct 12648 GAATAA 12643 >seq32 Length=83674 Score = 161 bits (178), Expect = 2e-34 Identities = 179/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || ||| || || ||||| || | || || || || Sbjct 19863 TTCTTACCACCACCTCTTAATCTTAAGACCAAGTGTAAGGTGGATTCCTTTTGGATGTTG 19804 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 ||||| ||||| | || | || || ||||| |||||||| || |||||||| |||||| Sbjct 19803 TAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGG 19744 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| || ||||| || ||| || || || ||||| ||||| Sbjct 19743 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAA 19684 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| ||||||| |||||||| ||||||||||| || || | ||| || |||||||| Sbjct 19683 GATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 19625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905129890332000