Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq2 179 7e-40
seq32 161 2e-34
>seq2
Length=194962
Score = 179 bits (198), Expect = 7e-40
Identities = 372/546 (68%), Gaps = 17/546 (3%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||| |||| | |||||||| || || || ||||| |||| || ||
Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119
Query 38892 TTCATAAAATCAAATGGATTTTTGGTA---TTATAATATTTTTCTCCTATC-AATACATA 38947
| |||||| || ||||| || |||| || ||| ||||| | || | || ||
Sbjct 13118 TCCATAAAGTCGAATGGGTT---GGTAACGTTGTAAACTTTTT-TGTTACCTAAGGCAAC 13063
Query 38948 TAATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAA 39007
||||||||||| || || |||||||| ||||| ||||||| | ||| |||||||| ||
Sbjct 13062 CAATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAA 13003
Query 39008 TAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagctt--gtt-t 39064
|||| | |||||| || ||| | |||||| ||||| || || |||| || |
Sbjct 13002 TAATGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGAT 12943
Query 39065 aattatcataattatattattttttgataatttatatttaatatgattcgcatataGTAA 39124
|||| | || ||| | | || | | ||| || | | | ||| ||
Sbjct 12942 AATTCTTTCAACAATAACAGCATCTGGTC-----TGTTTTGTAAG-TGGGAGAATAACAA 12889
Query 39125 ACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAA 39184
|||||| ||||| || ||||||||||| || | | | || |||||||| || |||||
Sbjct 12888 ACATGCGAAATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAA 12829
Query 39185 TCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAA 39244
|| |||||||| |||||||| || | ||| || || || ||||| || | |||||
Sbjct 12828 ACCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAA 12769
Query 39245 TATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAA 39304
||||| || ||| || || || | || |||| | || || | | ||||||
Sbjct 12768 GATACCTTCAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACT 12709
Query 39305 AATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTT 39364
||||| ||| ||||| || || || || |||||| |||| || || || ||||| ||
Sbjct 12708 GATCCATCTTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATT 12649
Query 39365 AAATAA 39370
|||||
Sbjct 12648 GAATAA 12643
>seq32
Length=83674
Score = 161 bits (178), Expect = 2e-34
Identities = 179/239 (75%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || ||| || || ||||| || | || || || ||
Sbjct 19863 TTCTTACCACCACCTCTTAATCTTAAGACCAAGTGTAAGGTGGATTCCTTTTGGATGTTG 19804
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
||||| ||||| | || | || || ||||| |||||||| || |||||||| ||||||
Sbjct 19803 TAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGG 19744
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || ||| || || || ||||| |||||
Sbjct 19743 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAA 19684
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||||| |||||||| ||||||||||| || || | ||| || ||||||||
Sbjct 19683 GATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 19625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905129890332000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |