Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq133 168 2e-36 seq2 127 5e-24 seq24 102 2e-16 >seq133 Length=29429 Score = 168 bits (186), Expect = 2e-36 Identities = 508/773 (66%), Gaps = 15/773 (2%) Strand=Plus/Minus Query 110379 ATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAAGCTGTTATTGAATGT 110438 |||||| | | ||||| || || |||||||| |||||||| | |||||| ||| | Sbjct 24876 ATGTTTTTAAGAGTTGCCATAGGCATTCATGGTAATGATATTGATAGTGTTATAGAAACT 24817 Query 110439 TATGATGTATTAA-GT--AAAAAGAAAGCTATTCATGCTACTCCTACCCTATTTAACGCA 110495 ||||| ||||| || || ||| | || ||||| | || || ||||||| || Sbjct 24816 TATGA---ATTAATGTCGAAGAAGTATTTCATACATGCATCACCGACATTATTTAATTCA 24760 Query 110496 GGAACT-AATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTAT 110554 |||||| ||| | | || ||||||| ||| | || | || | ||||| || || Sbjct 24759 GGAACTGAATATAATT-ATTTATCTTCTTGTTTTTTACTTGCCATGGAAGATGACTCAAT 24701 Query 110555 TGAAGGTATTTATGATGCTCTTAAAGAAA-CTGCTCTTATTTCTAAAAACTCTGGAGGAA 110613 || |||||||| | | ||| | || |||| | ||||||||| |||||||||| Sbjct 24700 AGACGGTATTTACAAAACA-TTACATAAGTCTGCATTAATTTCTAAAGCATCTGGAGGAA 24642 Query 110614 TTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTG 110673 |||| | || || ||| ||||| | || ||| || |||| | | | || || Sbjct 24641 TTGGGCTACATGTACATAATATTAGAGGAAGTGGATCATATATTTCTAGTTCTAATGGAA 24582 Query 110674 CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATC 110733 |||||| ||| | || || ||||| || || || ||| |||| || | |||||| ||| Sbjct 24581 CTTCAAGTGGCTTAGTGCCTATGTTGAGGGTTTTTAACAACACAGCGAGATATGTTGATC 24522 Query 110734 AAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATA 110790 |||| || ||| ||| || |||| || || ||| | ||||| ||||| | || | Sbjct 24521 AAGGAGGTAATAAAAGACCCGGAGCATTCGCCATTTATATTGAACCATGGCACTGTGACA 24462 Query 110791 TATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATT 110850 | | | ||||| | |||||||| || ||||| |||||| | |||| Sbjct 24461 TCATAAGTGTATTAGATTTAAAAAAAAATCATGGGAAGGAAGAGATGAGAGCAAGAGATT 24402 Query 110851 TATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGT 110910 | ||||||| | ||||| | |||||||| ||| | | || || || || | Sbjct 24401 TGTTTTATGGGTTATGGATACCTGATTTATTTATGGAGAGAGTAAAAAAAGATTTAGATT 24342 Query 110911 GGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTG 110970 ||||||| | | |||| || | |||||| || |||| |||||| | || ||| Sbjct 24341 GGTCTCTCTTTTCTCCTGATGTTAGTCCTGGATTAAGTGATTGTTATGGAGATGAATTTA 24282 Query 110971 AAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAG 111030 | | || |||||||| ||||| || ||| || | | ||| ||| ||| Sbjct 24281 GAAATCTCTACGAAAATTATGAGAAGTCAGGAAAAGCTATAAGTACTATTAAAGCACAAA 24222 Query 111031 AACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATA 111090 | || ||| ||| || |||| ||| ||||||||| || || || |||| || Sbjct 24221 AGCTATGGCGTGCAATTCTAGAATGTCAAACTGAAACTGGTGGCCCCTACATGTTGTTTA 24162 Query 111091 AAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTC 111142 | ||| ||| ||| || || || |||| ||| |||||||| ||||| || Sbjct 24161 AGGATGCAT-GTAACATGAAGTCGAACCAAAAGAACTTAGGAACTATTAAATC 24110 >seq2 Length=194962 Score = 127 bits (140), Expect = 5e-24 Identities = 328/494 (66%), Gaps = 7/494 (1%) Strand=Plus/Plus Query 110511 CAATTGGCTTCTTGCTTTCTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGA 110569 ||| || | ||||| |||||| | | || || ||||| |||||||| ||||| || || Sbjct 127096 CAAATGTCGTCTTG-TTTCTTGGTTGCTATGAAGGATGACTCTATTGATGGTATCTACGA 127154 Query 110570 TGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTC 110628 | | ||| |||| | ||| | ||||| || | |||| || || ||| | || | | Sbjct 127155 TAC-CTTGAAGACATGTGCCTTGATTTCCAAGAGTGCTGGTGGTATAGGTTTACATATCC 127213 Query 110629 ATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTG 110688 | | ||||| || | || || | || || | || ||| |||| | || | Sbjct 127214 ACAACATTCGTTCTACTGGTGCTTACATAGCTGGTACCAATGGTACTTCTAACGGTATCA 127273 Query 110689 TTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA---GA 110745 | || ||| | | || || ||| ||||||| ||||| ||||||||||||| || Sbjct 127274 TCCCTATGGTTCGTGTTTTTAACAACACTGCTCGTTATGTCGATCAAGGTGGTAACAAGA 127333 Query 110746 GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAG 110805 || || | ||||| | || | || || |||||| | ||||| || || ||| ||| Sbjct 127334 GACCAGGTGCCTTTGCCCTTTACTTAGAGCCATGGCATGCGGATATCTTCGATTTCATAG 127393 Query 110806 AACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865 | | | || ||||| || |||||| ||||| | |||||||| ||| | | Sbjct 127394 ATATCAGAAAGAATCATGGTAAGGAAGAAATTAGAGCTAGAGATTTATTCCCTGCCTTAT 127453 Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTC 110925 ||||| | |||||||||||||| | || | ||||||| ||| || | | | || Sbjct 127454 GGATTCCTGATTTATTCATGAAGAGAGTCGAGCAAAATGGTGACTGGACTTTATTCTCTC 127513 Query 110926 CTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAA 110985 | || |||||||| |||| ||||| || || | || || ||||| | ||| | Sbjct 127514 CAAATGAAGCTCCTGGTTTATCAGATGTCTACGGTGATGAATTCGAAGAATTGTACTCCA 127573 Query 110986 AATATGAAAAAGAA 110999 | |||||||||||| Sbjct 127574 AGTATGAAAAAGAA 127587 >seq24 Length=95165 Score = 102 bits (112), Expect = 2e-16 Identities = 159/226 (70%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 279870 TAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAAT 279929 || |||||||||| || || || |||||| | | | | |||| ||||||||||| | Sbjct 38085 TATTGGATGGTTTCAAGCCAGGTCAACGTAAGGTGCTTTACGGTTGCTTCAAAAGAAACT 38026 Query 279930 TGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATC 279989 || | ||||| || ||||||||| ||||||||||| ||| || |||| |||| Sbjct 38025 TGAAATCTGAAATCAAAGTCAATCAGTTAGCTGGTTATGTTTCTGAAAATACAGGATATC 37966 Query 279990 ATCACGGTG---AAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGG 280046 | || |||| || ||| |||| ||||| | ||| | || |||||||| || | Sbjct 37965 ACCATGGTGAACAATCGTTAGTTCA---GACTATTATTGGTTTAGCACAAGATTTCATTG 37909 Query 280047 CTTCAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTC 280092 ||| || || ||||| | ||| ||||||||| |||||||| Sbjct 37908 GTTCGAATAATTTAAACATTCTTAAGCCAAATGGTTCCTTTGGTTC 37863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186804588738940