Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2 205 7e-48 >seq2 Length=194962 Score = 205 bits (226), Expect = 7e-48 Identities = 407/591 (69%), Gaps = 19/591 (3%) Strand=Plus/Plus Query 43710 TTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768 |||| | |||| || || || || |||||||||||||| || || | || || || ||| Sbjct 12310 TTCCCAATCAAGTACCACGAAATCTGGCAAATGTACAAGAAGGCTGAAGCTTCCTTCTGG 12369 Query 43769 ACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACAT---TGGATTGCATTAA--AAC 43823 || || |||||| |||||||| |||||| || | ||| |||| | | | ||| Sbjct 12370 ACTGCCGAAGAAATTGATTTGGGTAAAGA--TACC-CATGACTGGAACGAAAAATTGAAC 12426 Query 43824 CACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATA 43882 |||| |||| | | || || || | ||||| || |||||||| ||||| || Sbjct 12427 AACAACGAAAGATACTTCATTTCCAGAATCTTGGCATTCTTTGCTGCTTCTGACGGTATT 12486 Query 43883 GTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGT 43942 || || ||||| |||||| || | ||||||||| | |||||||| ||| Sbjct 12487 GTTAACGAAAACTTGGTTGAAAACTTCTCTGCTGAAGTTCAAATTCCAGAAGCCAAGTGT 12546 Query 43943 TTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATA 44002 || ||||| || |||||| || ||||| || || || |||| ||| | || || Sbjct 12547 TTCTATGGTTTCCAAATTATGATGGAAAACATCCACTCTGAAACCTACTCGTTACTTATC 12606 Query 44003 GATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGA-AACA 44059 || || |||||||| ||| || ||||| | || || ||||| || || |||| Sbjct 12607 GACACCTACATCAAGGATC--CAAAGGAAGCTGACTTCTTATTCAATGCTATCGACAACA 12664 Query 44060 GTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT 44119 | ||| || || | || || |||||||| | | |||||| | | ||||| || Sbjct 12665 -TCCCTTGTATCAAGAAGAAGGCTGACTGGGCTTTAAGATGGATCAGTGATGATGATGCT 12723 Query 44120 TTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCG 44176 || || ||| || | || || || || | ||| ||||| || ||||| || || Sbjct 12724 TTATTCGGTGAAAGATTAGTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTCAGTGGTTCA 12783 Query 44177 TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAAT 44236 ||||| |||| || ||||||||||| ||||||| |||||||| || || || || ||| Sbjct 12784 TTTGCTTCCATTTTCTGGTTAAAGAAGAGAGGTTTAATGCCTGGTTTAACCTTCTCCAAT 12843 Query 44237 GAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTA 44287 || ||||| ||||||||||||| ||||| ||||| || || |||||| Sbjct 12844 GAATTAATCTGTCGTGATGAAGGTTTACACACTGATTTCGCATGTTTGTTA 12894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453384242700