Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25]
540 sequences; 11,700,921 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 205 7e-48
>seq2
Length=194962
Score = 205 bits (226), Expect = 7e-48
Identities = 407/591 (69%), Gaps = 19/591 (3%)
Strand=Plus/Plus
Query 43710 TTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768
|||| | |||| || || || || |||||||||||||| || || | || || || |||
Sbjct 12310 TTCCCAATCAAGTACCACGAAATCTGGCAAATGTACAAGAAGGCTGAAGCTTCCTTCTGG 12369
Query 43769 ACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACAT---TGGATTGCATTAA--AAC 43823
|| || |||||| |||||||| |||||| || | ||| |||| | | | |||
Sbjct 12370 ACTGCCGAAGAAATTGATTTGGGTAAAGA--TACC-CATGACTGGAACGAAAAATTGAAC 12426
Query 43824 CACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATA 43882
|||| |||| | | || || || | ||||| || |||||||| ||||| ||
Sbjct 12427 AACAACGAAAGATACTTCATTTCCAGAATCTTGGCATTCTTTGCTGCTTCTGACGGTATT 12486
Query 43883 GTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGT 43942
|| || ||||| |||||| || | ||||||||| | |||||||| |||
Sbjct 12487 GTTAACGAAAACTTGGTTGAAAACTTCTCTGCTGAAGTTCAAATTCCAGAAGCCAAGTGT 12546
Query 43943 TTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATA 44002
|| ||||| || |||||| || ||||| || || || |||| ||| | || ||
Sbjct 12547 TTCTATGGTTTCCAAATTATGATGGAAAACATCCACTCTGAAACCTACTCGTTACTTATC 12606
Query 44003 GATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGA-AACA 44059
|| || |||||||| ||| || ||||| | || || ||||| || || ||||
Sbjct 12607 GACACCTACATCAAGGATC--CAAAGGAAGCTGACTTCTTATTCAATGCTATCGACAACA 12664
Query 44060 GTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT 44119
| ||| || || | || || |||||||| | | |||||| | | ||||| ||
Sbjct 12665 -TCCCTTGTATCAAGAAGAAGGCTGACTGGGCTTTAAGATGGATCAGTGATGATGATGCT 12723
Query 44120 TTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCG 44176
|| || ||| || | || || || || | ||| ||||| || ||||| || ||
Sbjct 12724 TTATTCGGTGAAAGATTAGTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTCAGTGGTTCA 12783
Query 44177 TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAAT 44236
||||| |||| || ||||||||||| ||||||| |||||||| || || || || |||
Sbjct 12784 TTTGCTTCCATTTTCTGGTTAAAGAAGAGAGGTTTAATGCCTGGTTTAACCTTCTCCAAT 12843
Query 44237 GAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTA 44287
|| ||||| ||||||||||||| ||||| ||||| || || ||||||
Sbjct 12844 GAATTAATCTGTCGTGATGAAGGTTTACACACTGATTTCGCATGTTTGTTA 12894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397453384242700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |