Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 251 9e-62 seq1 98.7 1e-15 seq25 93.3 5e-14 >seq2 Length=194962 Score = 251 bits (278), Expect = 9e-62 Identities = 945/1462 (65%), Gaps = 29/1462 (2%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||| | || |||||||| || || ||||||| ||| || ||||| | || ||| Sbjct 128339 TAAATATTTGAAGTATATGGCTCGAAACATTCATTGTAACCTAATATTTGAGAGGTTGAG 128280 Query 118242 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTACGGAGACCCTT-TTCCCTAATGCGTT 118299 || || ||||| || || | | | || | || | | ||| | || |||| || Sbjct 128279 GCAGTTGGCATTGGAGCAACTAACAAAGAATTT-CTAATACCATGCTTAGCTAACTT-TT 128222 Query 118300 CCTTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357 || | || |||||||| || || || ||| || | | ||| | |||||| || Sbjct 128221 GTTTCAAAGTATCCCAGTCCCATAATTCAG--TTGGCTTTCTGTCCCATAAATCAAATTG 128164 Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417 | ||| || | || ||||| ||||||||| | | | ||||| || ||||| || || Sbjct 128163 CAAGATTCCCTTAGAGGCTGGAGATCCCTCATAGCTTTGGTATGGCCCTTCAACTTCAGC 128104 Query 118418 CAATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATT 118474 |||||| |||| || |||| || ||||||| || ||||| ||||| ||| || Sbjct 128103 CAATTCAATGGAG---GCTTCGACAGCACCGTGATAAATGGTTTCGAAAATTTGAGTGTT 128047 Query 118475 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAG 118534 | | |||| || || | ||| ||||| | | || | |||||| |||| || | Sbjct 128046 TAATTCCTTAGCTTCTTGGGAGTCAAATGGTAATCTTAATGCCATAAATGCATCTGCTAA 127987 Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCAC 118594 |||||||||||| | | ||||||| | || ||||||||| || || | || | || Sbjct 127986 ACCTTGGACACCTAAGGCAATTGGTCTATTTCTCATATTCGAGTTTCTTGCTTCCGGAAC 127927 Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654 || || | || | || |||| || || | || ||| |||||||| || | ||| Sbjct 127926 TGGGTAGTAGTTACGGTCAATAATTCTGTTCAAGTTACGGGTCACAACCTTAGTAACTTC 127867 Query 118655 ATGAAGCTTTTCGTAATCAAAACTGC--GAGTCTCT-TCATTGACATACTTAGGAAGG-- 118709 ||| | ||||||| |||| | | | ||| || || || || || | || || Sbjct 127866 ATGCAACTTTTCGAAATCGTACCAACTTGAGGTGCTATCCTTCTCA-ACAAAAGATGGTA 127808 Query 118710 --GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767 || || || |||| ||||| |||| ||||| | ||| ||| || | ||||| Sbjct 127807 AAGCAATGGAAGCCAAGTTACAAACAGCCACTTCATCAGGAGCAGAGTATTCAACAATTT 127748 Query 118768 CCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 118827 | || ||||| || |||||| | || || |||||||| |||| |||| |||||| Sbjct 127747 CGCAACATAAGTTGGATGACTTAATAATACCTAAATTCTTTTGGTTTGTCTTTTTGTTAC 127688 Query 118828 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 118887 | ||||| ||||| | |||| |||| || || || || ||||| | | | ||| || | Sbjct 127687 AAGCATCTTTGTATAACATGAATGGAGTACCAGTTTCAGTTTGAGCATCTAAAATGGCGT 127628 Query 118888 TCCA-GACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTG 118946 ||| | | || || | ||| | | | || |||| || ||||| | | Sbjct 127627 ACCATAATTTTTGCGCCTTG-ACAACCGATCTACCGCGATTTTCTTTTTCATACTTGGAG 127569 Query 118947 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 119006 || | |||| || || ||||| | | ||||| | || || || | || ||| || Sbjct 127568 TACAATTCTTCGAATTCATCACCGTAGACATCTGATAAACCAGGAGCTTCATTTGGAGAG 127509 Query 119007 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 || | || ||| | |||| | ||| || | ||||||||| | || || ||||| | Sbjct 127508 AATAAAGTCCAGTCACCATTTTGCTCGACTCTCTTCATGAATAAATCAGGAATCCATAAG 127449 Query 119067 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 119126 || | ||| | ||| | | | | |||||| | || ||||| | | || | Sbjct 127448 GCAGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCATGATTCTTTCTGATATCTATG 127389 Query 119127 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG 119185 || || | ||||||||| ||||| || || | ||| | || | | ||| | | Sbjct 127388 AAATCGAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAAAGGCACCTGGTCTCTTG 127329 Query 119186 --ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATA 119243 |||| | || | ||||| | |||||| |||||| ||||||| ||| || |||||| Sbjct 127328 TTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACACGAACCATAGGGATGATA 127269 Query 119244 CCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATG 119303 || | || ||||| || || || || | | | | | | |||||| Sbjct 127268 CCGTTAGAAGTACCATTGGTACCAGCTATGTAAGCACCAGTAGAACGAATGTTGTGGATA 127209 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 || | ||| ||||| || || | ||| || || || || | | | | ||||| Sbjct 127208 TGTAAACCTATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTATCGTAG 127149 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423 || ||||| || |||||| |||| | || | | ||| || |||||||||||| || Sbjct 127148 ATACCATCAATAGAGTCATCCTTCATAGCAACCAAGAAACAAGACGACATTTGAGGACTA 127089 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTG 119483 || |||||||| || || | ||||| | |||| |||| | | |||||||||| || Sbjct 127088 GGAGTACCAGCATTAAACAACGTTGGAGAACCGTGTGTGAAAAATCTTTGGGACATCATG 127029 Query 119484 TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 119543 | ||| | || | ||| ||||| | || || || |||| | ||| | ||| Sbjct 127028 TTGTACGATTCGATGACTCTTTCGATGTCATTACCATGGATTCCGACTGCGACTCTCATG 126969 Query 119544 AACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA-CTCTTCTC 119602 | || | ||| ||| |||| | |||| | || ||| | |||| |||| || Sbjct 126968 ATCAAATGTTGTGGTCTTTCGGCAACCTTACCGTTGATTCTCAACAAGTAAGATCTT-TC 126910 Query 119603 CAAGGTCTTGAGACCAAAATAG 119624 ||||||||||| || |||||| Sbjct 126909 CAAGGTCTTGAATCCGAAATAG 126888 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| | ||| || ||||| |||| | |||||| |||||| | ||| ||||| | ||| Sbjct 12873 GTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCAGGCATTAAACC 12814 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 | |||||| ||||||||||| | | |||||| ||| ||||||||| || || ||| Sbjct 12813 TCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATACCTTCAACAGC 12754 Query 130147 CGCGAACGCAA 130157 ||||| |||| Sbjct 12753 AGCGAAGGCAA 12743 >seq1 Length=230937 Score = 98.7 bits (108), Expect = 1e-15 Identities = 195/285 (68%), Gaps = 9/285 (3%) Strand=Plus/Plus Query 14150 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA 14209 ||||| |||||||||||| ||| | |||||| | || ||| || ||||| || ||| Sbjct 26370 TCAAACCCATCCATCTCAACCAACAATTGATTCAACGTAGTTTCCCGCTCATCGTTAGCA 26429 Query 14210 -----GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAA 14264 ||||| |||| ||||||||||| | || ||||||||||||| || | Sbjct 26430 CCGCTGGCATT--ACCCTTTGAACGTTGCTTACCAATCGCATCAATTTCATCGACAAATA 26487 Query 14265 CGATACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGA 14324 | || |||| ||||||||||||| | ||| | ||| || || | ||||| | Sbjct 26488 CTATTGATGGCGCATTTTCACGGGCAGTCTTAAATAAATCACGAACACGAGATGCACCAA 26547 Query 14325 CACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTGGAT-GAAGGGGACGTTAGAT 14383 |||| |||||||| || ||||| | | | ||| | | || || || ||||| | | Sbjct 26548 CACCAACAAACATTTCGACAAACTCAGAACCTGAA-ACAGAATAAAATGGAACGTTGGCT 26606 Query 14384 TCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 14428 ||||| || |||| ||| | || ||||| || || |||||| Sbjct 26607 TCACCAGCCGTGGCCTTGGCTATAAGCGTCTTACCGGTACCTGGT 26651 >seq25 Length=94343 Score = 93.3 bits (102), Expect = 5e-14 Identities = 176/258 (68%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 167949 TACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGTTGGTGCG 168008 ||||| | || || ||||||||||| | ||||| ||| ||||| |||||| Sbjct 90237 TACGGAAGAGTTGCTCCAAGATCTGGGTTAGCTGTTAAGCACGGTATTTCTACTGGTGCT 90296 Query 168009 GGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCAC 168068 |||||| | ||| | ||||| ||||||||||| || ||||| |||||||| || Sbjct 90297 GGTGTTATAGATGCTGACTACCGTGGTGAAGTCAAGGTTGTTCTTTTCAATCATTCACAA 90356 Query 168069 ACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTAGAGAGGTGCGAG 168128 | |||||| |||||| | ||||| ||| | || || ||| | | || || || || | Sbjct 90357 AAAGATTTTCAAATCCAGAAGGGAGATAGAATTGCTCAATTGGTATTGGAAAGAATCGTG 90416 Query 168129 ACGCCCCAAGTTGAGGAAATTGGTGCGGTTGA---GGA---GACCGAGAGAGGTTCAGGT 168182 | | | | || || |||| ||| | || ||| |||| |||||| |||| Sbjct 90417 ATGGCTGATATTAAGCAAATAACTGCTGAAGAATTGGATACTACCGCTAGAGGTGAAGGT 90476 Query 168183 GGATTTGGTTCTACAGGT 168200 || ||||| ||||| ||| Sbjct 90477 GGGTTTGGATCTACTGGT 90494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431025562400