Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2 129 6e-25 >seq2 Length=194962 Score = 129 bits (142), Expect = 6e-25 Identities = 392/603 (65%), Gaps = 2/603 (0%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||| ||||||| ||||| |||||||| | ||| || ||||| ||| | ||| Sbjct 126968 TCATGAGAGTCGCAGTCGGAATCCATGGTAATGACATCGAAAGAGTCATCGAATCGTACA 127027 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 || ||||| ||| | || ||||| |||| | || || | || || || ||||| Sbjct 127028 ACATGATGTCCCAAAGATTTTTCACACACGGTTCTCCAACGTTGTTTAATGCTGGTACTC 127087 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 | || || |||||| |||||| | || ||||||||||||||| ||||| || | Sbjct 127088 CTAGTCCTCAAATGTCGTCTTGTTTCTTGGTTGCTATGAAGGATGACTCTATTGATGGTA 127147 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 ||||||| || | ||| || || || |||||| | | || ||||| || | | Sbjct 127148 TCTACGATACCTTGAAGACATGTGCCTTGATTTCCAAGAGTGCTGGTGGTATAGGTTTAC 127207 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACG 19415 | | || || || || | |||| | || ||| || || || | ||| Sbjct 127208 ATATCCACAACATTCGTTCTACTGGTGCTTACATAGCTGGTACCAATGGTACTTCTAACG 127267 Query 19416 GTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCG 19475 ||||| |||| ||| | || || || |||||||| || | || ||| | || || || Sbjct 127268 GTATCATCCCTATGGTTCGTGTTTTTAACAACACTGCTCGTTATGTCGATCAAGGTGGTA 127327 Query 19476 GCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATT 19535 ||| | || | || ||| | ||| | ||||||||||| ||||| || | |||| Sbjct 127328 ACAAGAGACCAGGTGCCTTTGCCCTTTACTTAGAGCCATGGCATGCGGATATCTTCGATT 127387 Query 19536 TCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGG 19595 || | || | | ||| || ||| | || || || | | | || | ||| | | Sbjct 127388 TCATAGATATCAGAAAGAATCATGGTAAGGAAGAAATTAGAGCTAGAGATTTATTCCCTG 127447 Query 19596 CCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGA 19655 |||| |||||||| || |||||||| ||| || ||| | | | || ||| || | | Sbjct 127448 CCTTATGGATTCCTGATTTATTCATGAAGAGAGTCGAGCAAAATGGTGACTGG-ACTTTA 127506 Query 19656 -TGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714 | | || | ||| ||||| || | || |||||||| || | ||| | || ||| Sbjct 127507 TTCTCTCCAAATGAAGCTCCTGGTTTATCAGATGTCTACGGTGATGAATTCGAAGAATTG 127566 Query 19715 TAC 19717 ||| Sbjct 127567 TAC 127569 Score = 87.8 bits (96), Expect = 2e-12 Identities = 272/421 (65%), Gaps = 0/421 (0%) Strand=Plus/Minus Query 79468 AAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTG 79527 || || | ||| || || ||||| ||||| | || | ||| || | ||| | |||| Sbjct 127388 AAATCGAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAAAGGCACCTGGTCTCTTG 127329 Query 79528 CCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATG 79587 || || || | ||| || || || |||||||| ||||| || | ||| || | ||| Sbjct 127328 TTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACACGAACCATAGGGATGATA 127269 Query 79588 CCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAG 79647 |||| | || || || || || | ||| | | |||||||| | Sbjct 127268 CCGTTAGAAGTACCATTGGTACCAGCTATGTAAGCACCAGTAGAACGAATGTTGTGGATA 127209 Query 79648 TGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAG 79707 || | || || || || | | |||||| || || || ||| | || |||||| Sbjct 127208 TGTAAACCTATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTATCGTAG 127149 Query 79708 ATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTG 79767 || || || || ||||| ||||||||||| |||| ||| || |||||| || || | Sbjct 127148 ATACCATCAATAGAGTCATCCTTCATAGCAACCAAGAAACAAGACGACATTTGAGGACTA 127089 Query 79768 TTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGA 79827 ||||| || || || | || || | |||| ||||| || ||||| ||||| Sbjct 127088 GGAGTACCAGCATTAAACAACGTTGGAGAACCGTGTGTGAAAAATCTTTGGGACATCATG 127029 Query 79828 TCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATG 79887 | ||||| || |||| | || ||| | || ||||| ||||| ||||| | |||| Sbjct 127028 TTGTACGATTCGATGACTCTTTCGATGTCATTACCATGGATTCCGACTGCGACTCTCATG 126969 Query 79888 A 79888 | Sbjct 126968 A 126968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521097457600