Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 1e-15 >seq2 Length=194962 Score = 98.7 bits (108), Expect = 1e-15 Identities = 271/413 (66%), Gaps = 2/413 (0%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||| | ||||| | || ||||| ||| | ||| | | ||| || ||||| Sbjct 126968 TCATGAGAGTCGCAGTCGGAATCCATGGTAATGACATCGAAAGAGTCATCGAATCGTACA 127027 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| ||||| | || || |||| | ||||| |||| || |||||||| Sbjct 127028 ACATGATGTCCCAAAGATTTTTCACACACGGTTCTCCAACGTTGTTTAATGCTGGTACTC 127087 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 | ||||| |||||| || ||| |||| || |||||||||||||| || || || | Sbjct 127088 CTAGTCCTCAAATGTCGTCTTGTTTCTTGGTTGCTATGAAGGATGACTCTATTGATGGTA 127147 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || | ||| |||||| || |||||| | | |||||||| ||| | | Sbjct 127148 TCTACGATACCTTGAAGACATGTGCCTTGATTTCCAAGAGTGCTGGTGGTATAGGTTTAC 127207 Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 | | ||| | ||| | | || | || || || || || | | | Sbjct 127208 ATATCCACAACATTCGTTCTACTGGTGCTTACATAGCTGGTACCAATGGTACTTCTAACG 127267 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | ||| | |||||| | || || || |||||||| || || || ||| | || |||||| Sbjct 127268 GTATCATCCCTATGGTTCGTGTTTTTAACAACACTGCTCGTTATGTCGATCAAGGTGGTA 127327 Query 53553 GGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACAT 53604 ||| | | ||| | | || ||| | ||| | ||||| ||||| || || || Sbjct 127328 ACAAGAGACCAGGTG-CCTTTGCCCTTTACTTAGAGCCATGGCATGCGGATAT 127379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212306292000