Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq32 118 1e-21 seq2 107 2e-18 >seq32 Length=83674 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || |||||||| | || || ||||| ||||| | || ||||| || Sbjct 19627 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTC 19686 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || | ||| |||| || || |||||||| || ||||| || ||||| Sbjct 19687 AGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 19746 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | |||| || |||||||||||| | || |||| | | ||| || | || || || Sbjct 19747 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTACAA 19806 Query 27585 TGTCCAAAAGGAATCCAC 27602 |||||||||||||||| Sbjct 19807 CATCCAAAAGGAATCCAC 19824 >seq2 Length=194962 Score = 107 bits (118), Expect = 2e-18 Identities = 621/980 (63%), Gaps = 39/980 (4%) Strand=Plus/Minus Query 80782 GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACC 80841 || ||||||| |||||| ||||| || || | | ||||| ||| || || |||||| Sbjct 127937 GCTTCCGGAACTGGGTAGTAGTTACGGTCAATAATTCTGTTCAAGTTACGGGTCACAACC 127878 Query 80842 CGTGTAACATCATG-AAGTTTCTGAAA--GT--CGAATTG----GTTCCCCTTC---ACA 80889 ||||| ||||| || ||| |||| || | | ||| | | ||||| ||| Sbjct 127877 TTAGTAACTTCATGCAACTTTTCGAAATCGTACCAACTTGAGGTGCTATCCTTCTCAACA 127818 Query 80890 AATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAA 80948 || | || || || | ||| |||| || || || ||||| || |||| | | | | Sbjct 127817 AAAGATGGTAAAGCA-ATGGAAGCCAAGTTACAAACAGCCACTTCATCAGGAGCAGAGTA 127759 Query 80949 CTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGA 81008 || || ||||| || || || || |||||||| |||| | || || ||||||| Sbjct 127758 TTCAACAATTTCGCAACATAAGTTGGATGACTTAATAATACCTAAATTCTTTTGGTTTGT 127699 Query 81009 CTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTT 81068 ||| ||| ||||| || ||||| ||||| | || ||||| || || || | | Sbjct 127698 CTTTTTGTTACAAGCATCTTTGTATAACATGAATGGAGTACCAGTTTCAGTTTGAGCATC 127639 Query 81069 GAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACC----TTGCGGAATTTGCCTTCGG 81124 | ||||||| ||| | | |||||||||| ||| | || |||| | || Sbjct 127638 TAAAATGGCGTACCATAATTTTTGCGCCTTGACAACCGATCTACCGCGATTTTCTTTTT- 127580 Query 81125 CCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGC 81184 ||||||||| ||| ||| ||||| | |||||| | || | | | || Sbjct 127579 ---CATACTTGGAGTACAATTCTTCGAATTCATCACCGTAGACATCTGATAAACCAGGAG 127523 Query 81185 ACTCGTTAGGGCACA-TCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCG 81243 || || || | | | | || |||||| | | ||| || ||||||||| Sbjct 127522 CTTCATTTGGAGAGAATAAAGT-CCAGTCACCATTTTGCTCGACTCTCTTCATGAATAAA 127464 Query 81244 TCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCTGGT 81301 ||||| ||||| | ||| | ||| | || | ||| | | | || | ||| || | Sbjct 127463 TCAGGAATCCATAAGGCAGGGAATAAATCTCT--AGCTCTAATTTCTTCCTTACCATGAT 127406 Query 81302 TGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA 81361 | | | || | || || | ||| ||||||||||||||||| | || | ||| | Sbjct 127405 TCTTTCTGATATCTATGAAATCGAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAA 127346 Query 81362 TCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATA 81415 | || |||| || |||| || | ||| ||||| ||||| |||||| | Sbjct 127345 AGGCACCTGGTCTCTTGTTAC---CACCTTGATCGACATAACGAGCAGTGTTGTTAAAAA 127289 Query 81416 CACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCT 81475 |||| | ||||||||||||||| | || ||| || ||||| | || | || Sbjct 127288 CACGAACCATAGGGATGATACCGTTAGAAGTACCATTGGTACCAGCTATGTAAGCACCAG 127229 Query 81476 TGGCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCA 81534 | | || | ||| ||| || || ||| || ||||| | | ||| |||||| ||| Sbjct 127228 TAGAACGAATGTTGTGGATATGTAA-ACCTATACCACCAGCACTCTTGGAAATCAAGGCA 127170 Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAA 81594 || |||| ||| || || || || || || || | ||||| ||| ||||||| Sbjct 127169 CATGTCTTCAAGGTATCGTAGATACCATCAATAGAGTCATCCTTCATAGCAACCAAGAAA 127110 Query 81595 CAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654 || ||||| ||||| || | || ||||| |||| ||||| | |||| || Sbjct 127109 CAAGACGACATTTGAGGACTAGGAGTACCAGCATTAAACAACGTTGGAGAACCGTGTGTG 127050 Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGA 81714 ||| | | | ||||||| || || | ||| |||| | | || || | ||| || Sbjct 127049 AAAAATCTTTGGGACATCATGTTGTACGATTCGATGACTCTTTCGATGTCATTACCATGG 126990 Query 81715 ATACCGATAGCTACACGCAT 81734 || |||| || || | ||| Sbjct 126989 ATTCCGACTGCGACTCTCAT 126970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306550404800