Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20fabryi_20[genbank_20GCA_5F001447935.1_202015-11-25] 540 sequences; 11,700,921 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2 286 3e-72 >seq2 Length=194962 Score = 286 bits (316), Expect = 3e-72 Identities = 593/875 (68%), Gaps = 16/875 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || |||| ||||||||||||||| || || || |||| ||||| ||| Sbjct 13178 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAATTGGTCTTTCCGGCTAAGGAAATGTTT 13119 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCAC-ACTTTAGAGCTACAAG 4375 |||||||| || || || || || |||||||| ||||| || | || || || | Sbjct 13118 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACTTTTTTGTTACCTAAG-GCAACCAA 13060 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 |||| ||||| || ||||| | || || | ||| | | ||||| || || | ||| Sbjct 13059 TAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAA 13000 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 | | |||| |||| | ||||| || | ||| ||||| || ||||| ||||| || Sbjct 12999 TGAGATTGGTAAAGCGTCAATGAAAAATTCCTTTTCAATAGTAACTGCTTCAGTGATAAT 12940 Query 4496 ATCTTTTATTT-TATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554 ||||| | || | | |||| | ||| ||||| || || ||||| || | Sbjct 12939 -TCTTTCAACAATAACAGCATCTGGTCTGTTTTGTAAGTGGGAGAATAACAAACATGCGA 12881 Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614 ||||| || |||||||| || | | || | ||| || || || ||||| || |||| Sbjct 12880 AATCAGTGTGTAAACCTTCATCACGACAGATTAATTCATTGGAGAAGGTTAAACCAGGCA 12821 Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674 ||||||||||||| || | ||| || || | |||||||| ||| ||||| || |||| Sbjct 12820 TTAAACCTCTCTTCTTTAACCAGAAAATGGAAGCAAATGAACCACTGAAGAAGATACCTT 12761 Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATT 4734 | || || || || || ||||||| ||||| | | | || | |||||| Sbjct 12760 CAACAGCAGCGAAGGCAACTAATCTTTCACCGAATAAAGCATCATCATCACTGATCCATC 12701 Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA-- 4792 |||| ||||||| ||| || ||||| | || || || ||| ||||| || ||||| Sbjct 12700 TTAAAGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGTTGTCGATAGCATTGAATAAGA 12641 Query 4793 --TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850 | ||| || ||| || | || || ||||| || |||| || ||||| Sbjct 12640 AGTCAGCTTCCTT----TGGATCCTTGATGTAGGTGTCGATAAGTAACGAGTAGGTTTCA 12585 Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910 || || || ||||| || ||| || || || || || || | ||||||| | |||| Sbjct 12584 GAGTGGATGTTTTCCATCATAATTTGGAAACCATAGAAACACTTGGCTTCTGGAATTTGA 12525 Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970 ||||| | | || |||| || ||||||||||| || ||||||||| || ||||| Sbjct 12524 ACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACAATACCGTCAGAAGCAGCAAAG 12465 Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTT---TTCCAGTGG 5027 || ||||| | || || ||||| ||||| || | |||| ||||||| Sbjct 12464 AATGCCAAGATTCTGGAAATGAAGTATCTTTCGTTGTTGTTCAATTTTTCGTTCCAGTCA 12405 Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087 | ||||||| ||||||| |||||| ||||||| || || ||||| || || ||| Sbjct 12404 TGGGTATCTTTACCCAAATCAATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTG 12345 Query 5088 TACATAGACCAAATATCAGGATAC-TGAATCGGAA 5121 ||||| ||| || || | ||| ||| | |||| Sbjct 12344 TACATTTGCCAGATTTCGTGGTACTTGATTGGGAA 12310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046789479820