Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq212 224 1e-53 >seq212 Length=365203 Score = 224 bits (248), Expect = 1e-53 Identities = 579/874 (66%), Gaps = 11/874 (1%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||| |||||||| | |||||||||||||| || ||||| ||||||| || |||| Sbjct 283000 TTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTTT 283059 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 ||||||| || || || || ||| | || ||| | || | |||| || ||| Sbjct 283060 CCATAAAGTCGAATGGGTTGGTAACGTTGTAAACCTTTTTGT-TACCTAAGGCAACTAA- 283117 Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089 ||||||||| || || ||||| | |||||||||||||||| || || || |||| | Sbjct 283118 TAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAA 283177 Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 | | || | ||| | ||||||| || ||| || ||| ||||| | || || Sbjct 283178 TGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATAAT 283237 Query 16150 ATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGA 16208 || | | | | | ||| | | | || ||| || | || || |||| Sbjct 283238 -TCTTTCAACAATAACTGAATCTGGTCTGTTTTGTAAGTGAGAGAATAATAAGCATGCGA 283296 Query 16209 AGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCA 16268 | || ||||| ||||| || | | ||| | ||||||||| || ||||| || |||| Sbjct 283297 AATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCAGGCA 283356 Query 16269 TTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCT 16328 || |||| |||||||||||||| || | ||||||||| || ||||| ||||| | Sbjct 283357 TTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATACCTT 283416 Query 16329 CAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATT 16388 |||||| ||| || || | ||||| ||| || | ||||| | || || |||||| Sbjct 283417 CAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGATCCATC 283476 Query 16389 TCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATT 16448 | |||| || || || | || ||||| || | || || || || || || Sbjct 283477 TTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAATAAGA 283536 Query 16449 TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGT 16508 ||| ||||| ||| | || || || ||||| ||||| ||| |||| |||| Sbjct 283537 AGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAATAAGTAACGAGTAGGTTTCAGAGT 283596 Query 16509 GTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT 16568 | ||||| || || || || || || ||||| ||| || || | ||||| |||| Sbjct 283597 GGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTGAACTT 283656 Query 16569 CCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACG 16628 | | | || ||| ||| ||| || || || ||||||||| |||||||| || | Sbjct 283657 CAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAGAATG 283716 Query 16629 CCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAAT----ATGCCAATCTTTT 16684 |||| || ||||| ||| |||||| | ||| | | || ||| || | Sbjct 283717 CCAAGATTCTAGAGATGAAGTATCTTTCGT-TGTTGTTTAATTTTTCATTCCAGTCATGA 283775 Query 16685 AAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATAC 16744 ||| || || ||| | |||||| | ||||| ||| ||| | ||||| || ||| Sbjct 283776 GTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTGTAC 283835 Query 16745 ATTTTCCAAATATCATTGTATTGTATGGGAAATA 16778 |||| ||| || || | ||||| || || |||| Sbjct 283836 ATTTGCCAGATTTCGTGGTATTTGATTGGGAATA 283869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511411561650080