Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq212 425 6e-114 seq387 118 1e-21 >seq212 Length=365203 Score = 425 bits (470), Expect = 6e-114 Identities = 1469/2279 (64%), Gaps = 43/2279 (2%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 || || ||||| | ||| | || | || || | || || ||||| || || |||| | Sbjct 167012 GTAAACTGAATAGCAGCAGCAGCAGCTTGAGTTCTTAAGTAATACATACCTGTCTTTAAA 167071 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || |||| || || |||||||| |||| || | | || ||| || Sbjct 167072 CCCTTCTTCCAACCATAGAAATGCATTGAAGTTAACTTACCCATAGTTGGGTCTTTGATG 167131 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || ||||| | |||||| |||||| ||||| || | |||||||||||||| | || Sbjct 167132 TGAATATTTAAAGATTGTGATTGATCAATGAATGCAGCTCTGTCTGCAGCCATGTCAATA 167191 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAG 53046 || |||||| | ||||||||||| || || || || | ||||| || ||||||| Sbjct 167192 ATATGCTTTTGGGAAATTTCCCAAACGGTCTTGTATAAGGCCTTTAAT-TCATCTGGAAT 167250 Query 53047 GTTTGT-----ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 53101 ||| | ||| |||||||||| || ||||| | ||||| || |||||| Sbjct 167251 GTTAGGCAAGGATT--GAATAGATCCGTTATTAGAGATAATATTGTTCTTCATATCATCA 167308 Query 53102 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 53161 ||||| | | || |||| | | | | | || || || | ||| ||||| Sbjct 167309 TTCCAGATACCTAAATCAACTAAATCACGCAATAAGTATGGGTTGACAATTTGGAATTCA 167368 Query 53162 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 53221 |||| ||| ||||| | | ||||||||| ||||| || || | | ||||| | Sbjct 167369 CCAGCCAAAACTCTTCTGGAGTAAATATTTGAAGTATATGGCTCGAAGCATTCATTGTAA 167428 Query 53222 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 53281 ||||| ||||||| |||||| ||||| ||||| || || || || ||| |||||||||| Sbjct 167429 CCCAAGATTTGAGAAGTTGAGGCAGTTGGCATTGGAGCAACTAACAAAGAATTTCTAAGA 167488 Query 53282 CCGTATGTT---CTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACA 53338 || ||| | || | ||| | ||| | || ||||| | ||| | || | ||| Sbjct 167489 CC--ATGCTTAGCTAACTTT-TGTTTCAAAGTATCCCAGTCCCATAATTCAGTTGGTTTT 167545 Query 53339 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCG 53398 ||||| ||||| ||| || ||||| |||| || | | Sbjct 167546 CTATCCCATAAATCAAATTGTAAGATACCCTTAGAAGCTGGAGATCCCTCATAGGTTTGG 167605 Query 53399 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 53458 ||||||||||| ||||||| ||| || || | ||||||| |||||| || Sbjct 167606 TATGGTCCTTCAACTTCAGCTAACTCAATGGATGCTTCGACAGCACCGTGATAAATAGTC 167665 Query 53459 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT-TTAAGAG 53517 ||||| || | |||||| || | ||||| || |||||||| |||| |||| Sbjct 167666 TCGAAAATTTGAGTATTTAATTCCTTAGCTTCTTGGGAGTCAAATGG-TAATCTTAATGC 167724 Query 53518 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 53577 |||||||| |||||||| ||||| ||||| | | || ||||| | |||| |||| || Sbjct 167725 CATAAACGCATCTGCTAAACCTTGGACACCTAAGGCAATTGGTCTGTTTCTCATATTGGA 167784 Query 53578 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGAC 53637 | || |||||||||| || || | ||| || |||||| | || | ||| | | Sbjct 167785 GTTTCTTGCTTCTGGAACTGGGTAGAAGTTACGGTCAATAATTCTGTTCAAGTTACGGGT 167844 Query 53638 AATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-----AAATTG--------TCCAT 53684 | || || || || | | || |||||| || ||| ||| | Sbjct 167845 CACAACCTTAGTAACTTCATGTAACTTTTCAAAATCGTACCAACTTGAGGTACTGTCCTT 167904 Query 53685 CTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 53744 || ||||| | ||| || || || || | |||||||| || || |||| | | Sbjct 167905 CTCA-ACAAAAGAGGGCAAAGCGATGGAAGCTAAGTTACAAACAGCAACTTCATCGGGAG 167963 Query 53745 CCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTT 53804 | | |||| | || ||| || | || |||| || | |||||||| | || Sbjct 167964 CAGAGTATTCAACAATTTCACAACATAAGTTGGATGACTTAATAATACCTAAATTCTTTT 168023 Query 53805 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCT 53864 | || | ||||||||||| ||||| || || | |||||||| |||||||||||| | | Sbjct 168024 GGTTTGTTTTTTTGTTACAAGCATCTTTGTATAACATGAATGGTGTACCAGTTTCAGTTT 168083 Query 53865 GGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTT 53924 | | |||| ||| || | ||| | | ||||| | | ||| | | |||| Sbjct 168084 GAGCATCTAAAATGGCGTACCATAATTTCTGCGCCTTAACAACCGATCTACCACGATTTT 168143 Query 53925 CTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAG 53984 || |||| ||| | |||||| ||| || || || || | |||| || |||| Sbjct 168144 CTTTTTCATATTTGGAGTACAATTCTTCGAATTCATCACCGTAGACATCTGATAAACCAG 168203 Query 53985 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 54044 || ||||| ||| | | ||| | ||| ||||| | | | |||| ||||| || | Sbjct 168204 GAGCTTCATTTGGAGAGAACAAAGTCCAGTCTCCATTTTGTTCGACTCTCTTCATGAATA 168263 Query 54045 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 54104 |||||||||||| | || |||| ||||| | ||| ||| || || || || Sbjct 168264 AATCAGGAATCCATAAGGCAGGGAATAAGTCTCTAGCTCTGATTTCTTCCTTACCATGAT 168323 Query 54105 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCA 54164 ||||| | | ||| | ||| | | ||||| | |||||| || || ||||| | || | Sbjct 168324 TCTTTCTTATATCTATGAAATCAAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAA 168383 Query 54165 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 54224 | || || | ||||| || || ||||| | || | ||| ||||| ||| |||| | Sbjct 168384 AGGCGCCTGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACAC 168443 Query 54225 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 54284 | ||| ||||| |||||||| || | |||||| || || | || || ||| | | Sbjct 168444 GTACCATAGGAATGATACCATTAGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTAG 168503 Query 54285 CACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATC 54344 |||||| || || || ||| || || || || | || || || || || ||| Sbjct 168504 AACGAATGTTGTGGATATGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATG 168563 Query 54345 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 54404 || || ||||| ||||| || || ||| || || |||| || | ||||| Sbjct 168564 TCTTCAAGGTATCGTAGATACCATCGATAGAGTCTTCTTTCATAGCAACCAAGAAACAAG 168623 Query 54405 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 54464 |||||| || | | | ||| || || || ||||| || || ||| |||| || || Sbjct 168624 AAGACATCTGAGGGCTAGGAGTACCAGCGTTGAATAAAGTTGGGGAACCGTGAGTGAAAA 168683 Query 54465 ATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTC 54524 || ||| || | | ||||||| |||||| || || || || ||| |||| Sbjct 168684 ATCTTTGGGACATCATGTTGTACGATTCGATAACTCTTTCGATGTCATCACCATGGATTC 168743 Query 54525 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 54584 | |||||||| | ||| | || ||||| |||||||| | | ||| || ||| ||| Sbjct 168744 CGACTGCGACTCTCATAATCAAATGCTGTGGTCTTTCGGCAACCTTACCATTAATTCTCA 168803 Query 54585 GCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 54642 ||||| ||| ||||||| || || || |||||||||||||| ||||| || || || Sbjct 168804 ATAAGTAAGATCTTTCCAAGGTCTTGAATCCAAAATAGTTGTAGTTGAAA--TCACGATC 168861 Query 54643 GTAAATAATAACTGAGTTGAGTTTATCCTTATATTTG--TTAACTACATC-CATG-GTAA 54698 | | |||| | ||||| | | || || ||| | | || | ||| ||| || Sbjct 168862 AAACACAATAGCAGAGTTCAACTCAT--TTGAATTGGCTTGAATAATATCGTATGTGTCT 168919 Query 54699 TACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCT 54758 | | ||||| || || || ||| ||| | || || || ||||| | | | || |||| Sbjct 168920 T--TGGAAATCATAGGTGAGTGTAAACCAGTCTTTGGGTTAACATATTCATACAACTCCT 168977 Query 54759 TCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAG 54818 | | |||| | ||| | || | |||| ||||||| || || ||||| ||||| | Sbjct 168978 TACTGACTTGAGAGAATTGCTTGGTAGTTTGCTTGTGTAAGTTGGAAACGGCGATTCTTG 169037 Query 54819 CGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCA 54878 | || | ||| || || || || || |||||| | || || |||| || | || Sbjct 169038 CTGCCAAAATAGCGTAGTCAGGGTGGATTGTAGTCATATAAGCAGCAGTTTCAGCAGCCA 169097 Query 54879 GAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTA 54938 | || ||||| | || | || || | || | || |||||| || | | Sbjct 169098 AGTTATCTAATTCAATAGTGTTGACCCCTTGGTAAACACCAGAAATAACCCTCTGTGTGA 169157 Query 54939 TTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATG 54998 | || || || | || |||||| ||| |||||||||||| || || | || | Sbjct 169158 TAGCAACTGGTTCGACGTGTGCAGTGTCTAACCCATAACATAATCTTTGAACTCTAGCAG 169217 Query 54999 TGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAACATTTTT 55057 |||| || ||||| |||| ||||| ||||| || |||| ||| ||||| || Sbjct 169218 TGATCTTGTCAAAGCGGACAGGCTCCTTACGTCCATCTCTTTTATAAACATACATTATT 169276 Score = 255 bits (282), Expect = 7e-63 Identities = 595/887 (67%), Gaps = 24/887 (3%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| |||| || | |||||||| || || || || || |||| || || ||| Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 ||||| || ||| |||| |||||||| || || | |||| || || || | Sbjct 283059 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACCTTTTTGTTACCTAAGGCAACTAAT 283118 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023 |||||||| || || || || | ||| ||| | | ||| ||||| |||| | | Sbjct 283119 AATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAAT 283178 Query 24024 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 24083 | ||| | ||| || | |||||||| ||| |||| || || || || ||||| Sbjct 283179 GAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATAAT- 283237 Query 24084 GATCTT---ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140 |||| || | || | ||| | ||| || || | || |||||| Sbjct 283238 --TCTTTCAACAATAACTGAATCTGGTCTGTTTTGTAAGTGAGAGAATAATAAGCATGCG 283295 Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200 ||||| |||| ||| || || | || |||||||||||||| || || | || ||| Sbjct 283296 AAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCAGGC 283355 Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 24260 |||| || | ||| || | ||| || || || |||||||| ||| |||||||| ||| Sbjct 283356 ATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATACCT 283415 Query 24261 TCTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAAC-CGGCGCTGTCATGTATCCAC 24317 || || || || ||||||| | |||||| || ||||| | | ||| ||||| Sbjct 283416 TCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGATCCAT 283475 Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 24377 || ||||||||| |||||||| || | ||| || || | || |||||||| || | Sbjct 283476 CTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAATAAG 283535 Query 24378 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-TACATTTCCGA 24436 ||| | ||| || |||||| | || || ||||| || || | || |||| || Sbjct 283536 AAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAAT-AAGTAACGAGTAGGTTTCAGA 283594 Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496 || |||||||| || ||||| || |||||||||||| | || || | ||| || || Sbjct 283595 GTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTGAAC 283654 Query 24497 TTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556 ||| | | || ||| | || ||||| || || || |||||| || ||||| || Sbjct 283655 TTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAGAA 283714 Query 24557 CGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTG-TTAGTTT---ATTCCAA 24608 ||||| | || | || || ||| |||||| || || ||| ||| |||||| Sbjct 283715 TGCCAAGA----TTCTAGAGATGAAGTATCTTTCGT-TGTTGTTTAATTTTTCATTCCAG 283769 Query 24609 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 24668 |||| |||| ||| || ||| | |||||| | ||||| || || || || ||||| Sbjct 283770 TCATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTC 283829 Query 24669 TTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 || ||||| | |||||| || || |||| ||||| || | ||| || Sbjct 283830 TTGTACATTTGCCAGATTTCGTGGTATTTGATTGGGAATAAAACGAA 283876 >seq387 Length=274674 Score = 118 bits (130), Expect = 1e-21 Identities = 331/507 (65%), Gaps = 11/507 (2%) Strand=Plus/Plus Query 52807 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 52866 |||||||||||| | | || | || || | |||||| ||||| || ||||| | Sbjct 209980 TGTGAATTGAATAGCCCTAGTCGCAGCTTGTGTCCTTAGATAATACATACCAGTTTTCAA 210039 Query 52867 ACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTAT 52926 || ||| | || ||||| | ||||||| ||| | | | ||||| || Sbjct 210040 GCCTTTTTCCCAGGCATAGAAATGACTGCTTGTTAATTTACCAAAGGTTGGATCCTGTAA 210099 Query 52927 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 52986 || ||||||||| ||| || || ||||| ||| || || || || | | || Sbjct 210100 ATAAATATTCATACTTTGCAGCTGGTCAATGAATTTTCCTCTATCAGCTGCTAGATCAAT 210159 Query 52987 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG--- 53043 ||| ||||| | ||||||||||| |||||||||| | |||| | || | ||| Sbjct 210160 AATCACTTTTTGAGAAATTTCCCAAACTGTTTTATAAAGTTGCTTCAATTCATTTGGTAT 210219 Query 53044 AAGGTTTGTATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATT 53103 || | | | || ||||| ||||| | |||| || || |||| | || | ||| Sbjct 210220 AACGGGTATGTTTTGAATCGATCCGCTTTCTAAGATTATTTTATTTCTCATAGAAGAATT 210279 Query 53104 CCATAATTTTCTCTCGGTTAAAACTCT----AAGGAGATGCGGATTAACTACTTGAAATT 53159 ||| | | || ||||| | | ||| | || || ||||||||||||| Sbjct 210280 CCAGATACCTAGGTCAATTAAATCCTTCATCAAGTATTTG----TTCACTACTTGAAATT 210335 Query 53160 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 53219 ||||||| ||||| || || | || |||||| || || ||||| | | | |||||| Sbjct 210336 CTCCAGATAATACCCTTCGGTTATATATATTAGATGTGTAAGGTTCAAAACATTCATTAA 210395 Query 53220 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 53279 || ||||| |||| ||||| ||||| ||||| ||||| || | ||| ||| |||| Sbjct 210396 ACCCTAAAATCTGAGATGTTGAAGCAGTAGGCATTGGTGCAACTAGTAACGAATTCCTAA 210455 Query 53280 GACCGTATGTTCTGATTTTATCTTTTA 53306 ||| |||| | |||| ||||| Sbjct 210456 CACCTATTGTTTTAGCTTTAGATTTTA 210482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718304845120