Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq11 159 5e-34 seq315 131 3e-25 seq277 129 9e-25 seq417 104 4e-17 seq144 96.9 5e-15 >seq11 Length=459 Score = 159 bits (176), Expect = 5e-34 Identities = 178/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | ||||| || ||||| || |||| | ||| | | Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || || |||||||| || |||||||| ||||| || ||| Sbjct 397 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 338 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||| || || || |||||||| || || |||| ||| ||||| || Sbjct 337 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAAC 278 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||| ||||| ||||||||||| | ||| |||||||||| ||| || Sbjct 277 ATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGTATGCAAATTT 220 Score = 147 bits (162), Expect = 3e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | ||||| || ||||| || |||| | ||| | | Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || | || || |||||||| || |||||||| || || || ||| Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 110 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||| || || || ||||||||||| || |||| ||| ||||| || Sbjct 109 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 50 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767 |||||||||||||| |||||||| || ||||| | ||| ||||||||| Sbjct 49 ATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTA 1 >seq315 Length=97186 Score = 131 bits (144), Expect = 3e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || ||| | ||||| || || || || |||| | ||| | Sbjct 214 ATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAATCTTCC 155 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || || |||||||| || |||||||| ||||| || ||| Sbjct 154 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 95 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||| || || || ||||||||||| || |||| ||| ||||| || Sbjct 94 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 35 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 |||||||||||||| |||||||| || ||||| Sbjct 34 ATTCAAAAAGAATCTACTTTGCACTTAGTTTT 3 >seq277 Length=184381 Score = 129 bits (142), Expect = 9e-25 Identities = 115/144 (80%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || |||||||| || |||||||| ||||| || |||||||| | ||||| || || || Sbjct 11 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAG 70 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||||||||||| || |||| ||| ||||| || |||||||||||||| |||||||| Sbjct 71 CAATTAGAGGACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCAC 130 Query 124743 TTGGTTTTACGTTTACGAGGTGGT 124766 || ||||| | ||| |||||||| Sbjct 131 TTAGTTTTGAGATTAAGAGGTGGT 154 >seq417 Length=227 Score = 104 bits (114), Expect = 4e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 124650 CCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAA 124709 || || |||||||| | ||||| || || || ||||||||||| || |||| ||| Sbjct 227 CCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCT 168 Query 124710 GATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATT 124769 ||||| || |||||||||||||| |||||||| || ||||| | ||| |||||||||| Sbjct 167 GATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTATG 108 Query 124770 AAAAATT 124776 ||| || Sbjct 107 CAAATTT 101 >seq144 Length=22619 Score = 96.9 bits (106), Expect = 5e-15 Identities = 261/396 (66%), Gaps = 5/396 (1%) Strand=Plus/Plus Query 205575 AAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAA 205634 |||||| ||||| || |||| |||| || |||| |||| |||||||| || | | Sbjct 8224 AAAACA-TGACATGGGGGTAAGGCCATCTTATCAAAATCTGGCGGATTCCATGCCGACAT 8282 Query 205635 TATTATATTTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAATTGATC 205694 || || ||||| | || || |||| | || || |||| || | ||||||||| Sbjct 8283 GATAATTCTTCTATCGTATGGATTTGTTTTCAACTTTTTAATAACATCTTGTAATTGATC 8342 Query 205695 AAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCA 205754 || |||||| | || | ||| || || | || | || |||||||| | ||| Sbjct 8343 AACTCCTTGTCCAGAGTAGTCTGTGTCACAGTCCTTGTACTCTGCCCCAAAATGCCTCCA 8402 Query 205755 TTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttt 205814 ||||| || ||||||||||| |||||||| || | || || || || | Sbjct 8403 CTGAAATCCGTAAACTGGACCCAAATCACCCTCGCGACGGTCTTTCAATCCTATGGAGTC 8462 Query 205815 tatatattttaatgatccattttcatcccaaatatggattcctttattttttaGAATATT 205874 || |||| ||||||||| | |||||||| | | |||| ||| | | ||| || Sbjct 8463 TAAGTATTCCCTTGATCCATTGCCTTCCCAAATTTTAACACCTT--TTTCTGACAATTTT 8520 Query 205875 T--GTATTAGTTGATCCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAAC 205932 | | || || |||| || |||||| || || || | || ||| ||||| |||| Sbjct 8521 TTAGCATCCGTACATCCTTGTACAAACCACAACAACTCATGAATAATAGCTCTCGAAAAA 8580 Query 205933 ATTGATTTTGTTGTAAATAATGGAAATGAATCATCT 205968 | ||||| |||| ||| || |||| ||| ||| Sbjct 8581 ACCTTCTTTGTAGTAAGTAAGGGGAATGTATCGTCT 8616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755451807219200