Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq11 125 1e-23
seq315 114 2e-20
seq277 104 3e-17
seq417 84.2 3e-11
>seq11
Length=459
Score = 125 bits (138), Expect = 1e-23
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||||||||||||||||||||| || || ||||| ||
Sbjct 231 CCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 290
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || |||||||| || || || |||||||||||||| || || || |||
Sbjct 291 AAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 350
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| |||||| ||| ||| |||
Sbjct 351 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACT 410
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| || |||||||| || || || | || ||||||||
Sbjct 411 TCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457
Score = 116 bits (128), Expect = 6e-21
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || || || |||||||||||||| || || ||||| ||
Sbjct 3 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 62
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || |||||||| || || || |||||||||||||| || || ||||||
Sbjct 63 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 122
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| |||||| ||| ||| |||
Sbjct 123 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGACT 182
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| || |||||||| || || || | || ||||||||
Sbjct 183 TCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229
>seq315
Length=97186
Score = 114 bits (126), Expect = 2e-20
Identities = 152/218 (70%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
|| || || || |||||||||||||| || || ||||| || | ||||| | ||
Sbjct 3 AAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCC 62
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
|||||||| || || || |||||||||||||| || || || ||||| ||||| || |||
Sbjct 63 TCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCT 122
Query 146186 TGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTT 146245
|| |||||| ||| ||| ||||||| || || ||
Sbjct 123 TGAATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTC 182
Query 146246 TTACCTGTTAATGTTTTAATGAATATTTGCAT-TTTAT 146282
|||||||| |||||||||| ||| |||||||| |||||
Sbjct 183 TTACCTGTCAATGTTTTAACGAAGATTTGCATATTTAT 220
>seq277
Length=184381
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || || || |||||||||||||| || || ||||| ||
Sbjct 153 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 94
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || |||||||| || || || |||||||||||||| || || || |||
Sbjct 93 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 34
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 33 ATACCTTCCTTGTCTTG 17
>seq417
Length=227
Score = 84.2 bits (92), Expect = 3e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || || || |||||||||||||| || || ||||| ||
Sbjct 112 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 171
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGG 146166
| ||||| | || |||||||| || || || |||||||||||||| || || ||
Sbjct 172 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGG 227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743522273428480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |