Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq212 286 3e-72 >seq212 Length=365203 Score = 286 bits (316), Expect = 3e-72 Identities = 590/867 (68%), Gaps = 23/867 (3%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||||||||||||||||| ||||| || || ||||| |||| ||||| ||| Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAAC 16060 |||||||| || || || || | ||| | ||| || | | || || | | Sbjct 283059 TCCATAAAGTCGAATGGGTTGGT--AACGTT-GTAAACCTTTTTGTTACCTAAGGCAACT 283115 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 ||||||||||| || || ||||| | || || |||||| | ||||||||| |||| | Sbjct 283116 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 283175 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 ||| | || | || || ||||| | |||||| ||| |||| |||||| |||| Sbjct 283176 AATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATA 283235 Query 16181 ATATCTCTTACTACACTATTTAACGGAGG---GTTTAATAAGTGTTTAAACATTATACAA 16237 || |||| | ||| || | | || |||| |||||| || | || || Sbjct 283236 AT---TCTTTCAACAATAACTGAATCTGGTCTGTTTTGTAAGTGAGAGAATAATAAGCAT 283292 Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297 || |||||| ||| || ||||| || | || ||||| ||||| || || || | ||| Sbjct 283293 GCGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCA 283352 Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357 ||||||| |||| || || | ||| || |||| |||||||||||| ||||| ||| Sbjct 283353 GGCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATA 283412 Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCG---TACGTTCTAtttttactttct 16414 |||||||| || || || ||||| |||| || ||| ||| || | ||| Sbjct 283413 CCTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACT---G 283469 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 |||||| || |||||||| || || | || | ||| ||||| || || ||||| Sbjct 283470 ATCCATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTG 283529 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 ||||| | | | ||| || |||| || ||||| || || ||||| || || Sbjct 283530 AATAAGAAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAATAAGTAACGAGTAGGTT 283589 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || || || || || ||||| || || ||||| || || ||| | ||||| | ||| Sbjct 283590 TCAGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATT 283649 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || ||||||| | || |||| | ||||||||||| || || || || ||| ||| Sbjct 283650 TGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCA 283709 Query 16655 AAAAACGCAAGTATGTGTTTA-ATAAAAtttttttCGTT-ATCTGAAAGTTTTAA--CCA 16710 || || || | || | | | || || | | ||||||| | | || |||| | ||| Sbjct 283710 AAGAATGCCAAGAT-TCTAGAGATGAAGTATCTTTCGTTGTTGTTTAATTTTTCATTCCA 283768 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770 |||| | ||| || |||||||| ||||| ||||||| || ||||| ||||||| Sbjct 283769 GTCATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTT 283828 Query 16771 TTTATACATTTTCCATATGTCTTCGTA 16797 || ||||||| ||| || || | ||| Sbjct 283829 CTTGTACATTTGCCAGATTTCGTGGTA 283855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462509433058400