Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq11 89.7 4e-13
seq315 86.0 5e-12
seq392 82.4 6e-11
>seq11
Length=459
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| |||||||||||||||||||| || | | ||| ||| ||||| ||||| || ||
Sbjct 261 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCTTCTAATTGCTTACCG 320
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
|| | || | ||||||||| || || | |||||||| || ||| | ||||
Sbjct 321 GCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 380
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||| ||| | ||| ||| | |||||| | || || ||||| ||
Sbjct 381 ACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGTC 440
Query 18309 TTTACAAAAATTTGCAT 18325
|| ||||||||||||||
Sbjct 441 TTGACAAAAATTTGCAT 457
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| |||||||||||||||||||| || | | ||| ||| || || ||||| || ||
Sbjct 33 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCG 92
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
|| | || | ||||||||| || || | |||||||| || ||| | ||||
Sbjct 93 GCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 152
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||| ||| | ||| ||| | |||||| | || || ||||| ||
Sbjct 153 ACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGTC 212
Query 18309 TTTACAAAAATTTGCAT 18325
|| ||||||||||||||
Sbjct 213 TTGACAAAAATTTGCAT 229
>seq315
Length=97186
Score = 86.0 bits (94), Expect = 5e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| |||||||||||||||||||| || | | ||| ||| || || ||||| || ||
Sbjct 18 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCG 77
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
|| | || | ||||||||| || || | |||||||| || ||| | ||||
Sbjct 78 GCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 137
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||| || | ||| ||| | ||| ||| | || || |||||||||
Sbjct 138 ACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCTGTCAATGTT 197
Query 18309 TTTACAAAAATTTGCATTTTTA 18330
|| || || |||||||| ||||
Sbjct 198 TTAACGAAGATTTGCATATTTA 219
>seq392
Length=124811
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||| |||||||||||||| || | | ||| ||| |||||| ||||| || ||
Sbjct 104831 GTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCA 104890
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
|| |||| | ||||||||| || || | |||||||| || || | ||||
Sbjct 104891 GCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTG 104950
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| |||||| | || ||| | ||| ||| | || || || || ||
Sbjct 104951 ACGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTC 105010
Query 18309 TTTACAAAAATTTGCATTTT 18328
|| || ||||||||||||||
Sbjct 105011 TTGACGAAAATTTGCATTTT 105030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379341947274780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |