Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 4e-13 seq315 86.0 5e-12 seq392 82.4 6e-11 >seq11 Length=459 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || |||||||||||||||||||| || | | ||| ||| ||||| ||||| || || Sbjct 261 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCTTCTAATTGCTTACCG 320 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 || | || | ||||||||| || || | |||||||| || ||| | |||| Sbjct 321 GCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 380 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | ||| ||| ||| | ||| ||| | |||||| | || || ||||| || Sbjct 381 ACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGTC 440 Query 18309 TTTACAAAAATTTGCAT 18325 || |||||||||||||| Sbjct 441 TTGACAAAAATTTGCAT 457 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || |||||||||||||||||||| || | | ||| ||| || || ||||| || || Sbjct 33 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCG 92 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 || | || | ||||||||| || || | |||||||| || ||| | |||| Sbjct 93 GCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 152 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | ||| ||| ||| | ||| ||| | |||||| | || || ||||| || Sbjct 153 ACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGTC 212 Query 18309 TTTACAAAAATTTGCAT 18325 || |||||||||||||| Sbjct 213 TTGACAAAAATTTGCAT 229 >seq315 Length=97186 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || |||||||||||||||||||| || | | ||| ||| || || ||||| || || Sbjct 18 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCG 77 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 || | || | ||||||||| || || | |||||||| || ||| | |||| Sbjct 78 GCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 137 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | ||| ||| || | ||| ||| | ||| ||| | || || ||||||||| Sbjct 138 ACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCTGTCAATGTT 197 Query 18309 TTTACAAAAATTTGCATTTTTA 18330 || || || |||||||| |||| Sbjct 198 TTAACGAAGATTTGCATATTTA 219 >seq392 Length=124811 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||| |||||||||||||| || | | ||| ||| |||||| ||||| || || Sbjct 104831 GTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCA 104890 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 || |||| | ||||||||| || || | |||||||| || || | |||| Sbjct 104891 GCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTG 104950 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | ||| |||||| | || ||| | ||| ||| | || || || || || Sbjct 104951 ACGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTC 105010 Query 18309 TTTACAAAAATTTGCATTTT 18328 || || |||||||||||||| Sbjct 105011 TTGACGAAAATTTGCATTTT 105030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379341947274780