Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq212 183 3e-41
seq11 102 7e-17
seq392 91.5 1e-13
seq387 84.2 2e-11
>seq212
Length=365203
Score = 183 bits (202), Expect = 3e-41
Identities = 379/562 (67%), Gaps = 4/562 (1%)
Strand=Plus/Plus
Query 23420 TTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCA 23479
|||||| | | ||| | || || || | ||||||||||| ||||| | ||||| ||||
Sbjct 168323 TTCTTTCTTATATCTATGAAATCAAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCA 168382
Query 23480 AACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACT 23539
|| ||||| |||||||| || || || |||||||| ||||| || |||||||| | ||
Sbjct 168383 AAGGCGCCTGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACA 168442
Query 23540 CTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTT 23599
| || ||| || | || ||| || || | || || || | | ||| |
Sbjct 168443 CGTACCATAGGAATGATACCATTAGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTA 168502
Query 23600 GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659
| |||| |||||| | || ||||| || || || | || || |||| || |||
Sbjct 168503 GAACGAATGTTGTGGATATGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAT 168562
Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719
|||| || |||||||| || ||||| ||| ||||| | || |||||||||||
Sbjct 168563 GTCTTCAAGGTATCGTAGATACCATCGATAGAGTCTTCTTTCATAGCAACCAAGAAACAA 168622
Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779
|||||||| || | | || ||| | || ||| | || ||| |||| || ||
Sbjct 168623 GAAGACATCTGAGGGCTAGGAGTACCAGCGTTGAATAAAGTTGGGGAACCGTGAGTGAAA 168682
Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839
||| | ||||| | ||||||| ||||| | || ||||| || || || ||
Sbjct 168683 AATCTTTGGGACATCATGTTGTACGATTCGATAACTCTTTCGATGTCATCACCATGGATT 168742
Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG--ACCGTGACGCCGTTAATTT 23897
|||| ||||| | ||| |||| | || ||||| ||| | | | | || ||||||
Sbjct 168743 CCGACTGCGACTCTCATAATCAAATGCTGTGGTCTTTCGGCAACCTTA--CCATTAATTC 168800
Query 23898 TGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGAT 23957
| || | || || | || || || || ||||||||||||| ||||| || |||||||
Sbjct 168801 TCAATAAGTAAGATCTTTCCAAGGTCTTGAATCCAAAATAGTTGTAGTTGAAATCACGAT 168860
Query 23958 CGTGCACTATGGCCGAATTCAA 23979
| ||| || || || |||||
Sbjct 168861 CAAACACAATAGCAGAGTTCAA 168882
>seq11
Length=459
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || |||||| ||||||| || || |||||| | || || ||| | ||
Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | || | ||||| | || ||||||||||| | || || |||||
Sbjct 397 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 338
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || ||||| || || || || |||||| || || | ||||| |||
Sbjct 337 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAAC 278
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| ||| | ||| |||| | ||| | || || ||||
Sbjct 277 ATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGTA 229
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || |||||| ||||||| || || |||||| | || || ||| | ||
Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | || | ||||| | || ||||||||||| | || || |||||
Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 110
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || ||||| || || || || || ||| || || | ||||| |||
Sbjct 109 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 50
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| ||| | || | || | ||| | || || ||||
Sbjct 49 ATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTA 1
>seq392
Length=124811
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| | || || || || || ||| | || |||||| |
Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || ||||||||||| | || || |||
Sbjct 104970 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 104911
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | |||| |||||||| || || || ||||| || || | |||||
Sbjct 104910 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 104851
Query 31370 AACATTCAAAAAGAATCGAC 31389
||||||||||| ||||| ||
Sbjct 104850 AACATTCAAAAGGAATCCAC 104831
>seq387
Length=274674
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412
|||||| | ||| |||||||||| | || |||| || | || | || ||| || ||
Sbjct 211234 CATAAATAAATCGGGTATCCATAATCCATAAAACAAATCTCTTGCTCTCATCTCTTCCTT 211293
Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472
|| || ||||||||||| || | | | ||| |||||| ||||| | ||
Sbjct 211294 ACCATGATTTTTTTTCAAATCTAATACACTTATAATGTCACAATGCCATGGCTCAATATA 211353
Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532
|| ||| || || || |||||||| || || || ||||| || || | || || |||||
Sbjct 211354 AATGGCGAAGGCTCCGGGTCTCTTGTTACCTCCTTGATCAACATACCTCGCTGTATTGTT 211413
Query 23533 GTACACTCTTAGCATCGGCAC 23553
| | ||||||| ||| || ||
Sbjct 211414 GAAAACTCTTAACATAGGTAC 211434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445763925996480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |