Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq212 183 3e-41 seq11 102 7e-17 seq392 91.5 1e-13 seq387 84.2 2e-11 >seq212 Length=365203 Score = 183 bits (202), Expect = 3e-41 Identities = 379/562 (67%), Gaps = 4/562 (1%) Strand=Plus/Plus Query 23420 TTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCA 23479 |||||| | | ||| | || || || | ||||||||||| ||||| | ||||| |||| Sbjct 168323 TTCTTTCTTATATCTATGAAATCAAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCA 168382 Query 23480 AACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACT 23539 || ||||| |||||||| || || || |||||||| ||||| || |||||||| | || Sbjct 168383 AAGGCGCCTGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACA 168442 Query 23540 CTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTT 23599 | || ||| || | || ||| || || | || || || | | ||| | Sbjct 168443 CGTACCATAGGAATGATACCATTAGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTA 168502 Query 23600 GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659 | |||| |||||| | || ||||| || || || | || || |||| || ||| Sbjct 168503 GAACGAATGTTGTGGATATGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACAT 168562 Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719 |||| || |||||||| || ||||| ||| ||||| | || ||||||||||| Sbjct 168563 GTCTTCAAGGTATCGTAGATACCATCGATAGAGTCTTCTTTCATAGCAACCAAGAAACAA 168622 Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779 |||||||| || | | || ||| | || ||| | || ||| |||| || || Sbjct 168623 GAAGACATCTGAGGGCTAGGAGTACCAGCGTTGAATAAAGTTGGGGAACCGTGAGTGAAA 168682 Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839 ||| | ||||| | ||||||| ||||| | || ||||| || || || || Sbjct 168683 AATCTTTGGGACATCATGTTGTACGATTCGATAACTCTTTCGATGTCATCACCATGGATT 168742 Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG--ACCGTGACGCCGTTAATTT 23897 |||| ||||| | ||| |||| | || ||||| ||| | | | | || |||||| Sbjct 168743 CCGACTGCGACTCTCATAATCAAATGCTGTGGTCTTTCGGCAACCTTA--CCATTAATTC 168800 Query 23898 TGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGAT 23957 | || | || || | || || || || ||||||||||||| ||||| || ||||||| Sbjct 168801 TCAATAAGTAAGATCTTTCCAAGGTCTTGAATCCAAAATAGTTGTAGTTGAAATCACGAT 168860 Query 23958 CGTGCACTATGGCCGAATTCAA 23979 | ||| || || || ||||| Sbjct 168861 CAAACACAATAGCAGAGTTCAA 168882 >seq11 Length=459 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||| ||||||| || || |||||| | || || ||| | || Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | ||||| | || ||||||||||| | || || ||||| Sbjct 397 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 338 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||| || || || || |||||| || || | ||||| ||| Sbjct 337 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAAC 278 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| ||| | ||| |||| | ||| | || || |||| Sbjct 277 ATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGTA 229 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||| ||||||| || || |||||| | || || ||| | || Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | ||||| | || ||||||||||| | || || ||||| Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 110 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||| || || || || || ||| || || | ||||| ||| Sbjct 109 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 50 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| ||| | || | || | ||| | || || |||| Sbjct 49 ATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTA 1 >seq392 Length=124811 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| |||||| | || || || || || ||| | || |||||| | Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | | || | ||||| | || ||||||||||| | || || ||| Sbjct 104970 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 104911 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | |||| |||||||| || || || ||||| || || | ||||| Sbjct 104910 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 104851 Query 31370 AACATTCAAAAAGAATCGAC 31389 ||||||||||| ||||| || Sbjct 104850 AACATTCAAAAGGAATCCAC 104831 >seq387 Length=274674 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 |||||| | ||| |||||||||| | || |||| || | || | || ||| || || Sbjct 211234 CATAAATAAATCGGGTATCCATAATCCATAAAACAAATCTCTTGCTCTCATCTCTTCCTT 211293 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 || || ||||||||||| || | | | ||| |||||| ||||| | || Sbjct 211294 ACCATGATTTTTTTTCAAATCTAATACACTTATAATGTCACAATGCCATGGCTCAATATA 211353 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 || ||| || || || |||||||| || || || ||||| || || | || || ||||| Sbjct 211354 AATGGCGAAGGCTCCGGGTCTCTTGTTACCTCCTTGATCAACATACCTCGCTGTATTGTT 211413 Query 23533 GTACACTCTTAGCATCGGCAC 23553 | | ||||||| ||| || || Sbjct 211414 GAAAACTCTTAACATAGGTAC 211434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763925996480