Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq212 149 1e-30 seq144 104 5e-17 >seq212 Length=365203 Score = 149 bits (164), Expect = 1e-30 Identities = 582/889 (65%), Gaps = 51/889 (6%) Strand=Plus/Minus Query 101514 TCTGGGAAATGTACAAAAAAGAGGTTGCCTGTTTTTGGACATTGGAAGAGATTGATTTCG 101573 ||||| |||||||||| || | | || | || ||||| ||||| || ||||| | Sbjct 283845 TCTGGCAAATGTACAAGAAGGCTGAAGCTTCCTTCTGGACTGCCGAAGAAATCGATTTAG 283786 Query 101574 AAAGGGATCCTAAAGATTGGGAG--AAACTCACTCAAGATGAGAAGGAT--TTCATTCTC 101629 | |||| || | || ||| | ||| | | ||| | ||| ||| ||||| ||| Sbjct 283785 GTAAGGATACTCATGACTGGAATGAAAAATTAAACAACAAC-GAAAGATACTTCAT-CTC 283728 Query 101630 CAGATTCT-GGCGTTCTTTGCATCCTCTGACGGAATTGTAATTGAAAATCT--TACAACA 101686 ||| ||| ||| |||||||| | |||||||| ||||| | ||||| | | || | Sbjct 283727 TAGAATCTTGGCATTCTTTGCTGCTTCTGACGGTATTGTCAACGAAAACTTGGTTGAAAA 283668 Query 101687 CGTCTTCG-TCAAGTGGCGCAGATTCCAGAAGCGAGGAGTTTCTTTGACTTCCAAGTTGG 101745 | ||| | | |||| || ||||||||||| | |||||| | |||||| || Sbjct 283667 CTTCTCTGCTGAAGTT---CAAATTCCAGAAGCCAAATGTTTCTACGGTTTCCAAATTAT 283611 Query 101746 AATGGAGAGTATTCATG--GCAACGTCTACGGAGAACTGATTGATAGACTGGTGCC-CGA 101802 ||||| | || || | ||| |||| ||| ||||| | || | | | | Sbjct 283610 GATGGAAAACATCCACTCTGAAAC--CTACTCGTTACTTATTGACA--CT--TACATCAA 283557 Query 101803 CGAA--AAAGACA--AGGCTATCTTGTTTAACGCTGC--ACAACACTTCCCCGCCATCAA 101856 || |||| | || || |||| || || ||| |||||| |||| ||||| Sbjct 283556 AGATCCAAAGGAAGCAGACT-TCTTATTCAATGCTATCGACAACA--TCCCATGTATCAA 283500 Query 101857 GAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAG-CAATAACG----ATTTGGCGGAA 101911 |||||||| | |||||| | | ||||| || | || | | ||| ||| ||| Sbjct 283499 GAAGAAGGCTGATTGGGCTTTAAGATGGAT-CAGTGATGATGATGCGTTATTCGGC-GAA 283442 Query 101912 CTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATT 101971 | | |||||||| || || |||||||| || ||||| |||||| |||| || || ||| Sbjct 283441 AGATTAGTTGCCTTCGCAGCTGTTGAAGGTATTTTCTTCAGTGGTTCATTTGCTTCTATT 283382 Query 101972 TTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCT 102031 |||||| | ||||| || ||| | |||||||| | |||| |||||| || || || | | Sbjct 283381 TTCTGGTTAAAGAAGAGAGGTTTAATGCCTGGTTTAACCTTCTCCAACGAATTAATCTGT 283322 Query 102032 AGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGAT 102091 | || |||||| | ||| || || |||||| | | || | | | | Sbjct 283321 CGTGATGAAGGTTTACATACTGATTTCGCATGCTTATTATT--------CTCTCACTTAC 283270 Query 102092 ACCCCA-TCAAGAGAAAG-GATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAAC 102146 | || | ||| || ||| |||| |||| |||||||||| || || ||| Sbjct 283269 AAAACAGACCAGATTCAGTTATTGTTGAAAGAATTATCACTGAAGCAGTTACTATCGAAA 283210 Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206 |||||||| || | | | | || | |||| | || |||||||| || || ||| Sbjct 283209 AAGAATTTTTCGTTGATGCTTTACCAATCTCATTATTAGGTATGAACTGTAACTTAATGT 283150 Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266 | || ||| ||||||| || || |||| | |||| |||| | || ||||| | Sbjct 283149 GTCAATACGTTGAATTCGTTGCTGATAGATTATTAGTTGCCTTAGGTAACAAAAAGGTTT 283090 Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACT 102326 | || ||||||||||| ||| || ||||| || ||||| | | |||||||||| Sbjct 283089 ACAACGTTACCAACCCATTCGACTTTATGGAAAACATTTCTTTAGCCGGAAAGACCAACT 283030 Query 102327 TTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTC 102375 | || ||||||||||| || || ||| ||| |||||||| || Sbjct 283029 TCTTCGAAAAGAGAGTTAGTGACTACCAAAAGGCCGGTGTCATGGCATC 282981 >seq144 Length=22619 Score = 104 bits (114), Expect = 5e-17 Identities = 278/417 (67%), Gaps = 11/417 (3%) Strand=Plus/Minus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCC---AAATGAGGTTCTCTCTT 35209 || ||||||||||| || ||| ||| | |||| || | || |||| ||| ||| Sbjct 8678 GACAGAACTGGAACCGGTACTAAATCACTCTTTGCTCCTCCACAATTGAGATTCAATCTC 8619 Query 35210 CGAGACGACACTATTCCAGTT-CTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGA 35268 |||||| || ||||| || || ||||| ||||| |||| | ||||| || | | Sbjct 8618 TCAGACGATAC-ATTCCCCTTACTTACTACAAAGAAGGTTTTTTCGAGAGCTATTATTCA 8560 Query 35269 AGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCC-AAGAAGAAGA 35327 || | | |||||| | || ||| || || ||| ||||| | || ||| | Sbjct 8559 TGAGTTGTTGTGGTTTGTACAAGGATGTACGGATGCTAAAAAATTGTCAGAAAAAGGTGT 8500 Query 35328 TACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387 || | | |||| || ||||| || |||||| || ||| | ||| || | || Sbjct 8499 TAAAATTTGGGAAGGC-AATGGATCAAGGGAATACTTAGACTCCATAGGATTGAAAGACC 8441 Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447 | ||||| |||||||| || || |||||||| || ||| | |||||||| || || | Sbjct 8440 GTCGCGAGGGTGATTTGGGTCCAGTTTACGGATTTCAGTGGAGGCATTTTGGGGCAGAGT 8381 Query 35448 ATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTA- 35506 | | |||| | || || ||||| | || |||||||||| ||| || || Sbjct 8380 ACAAGGACTGTGACACAGACTACTCTGGACAAGGAGTTGATCAATTA--CAAGATGTTAT 8323 Query 35507 -AAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562 || | ||| | ||||||| | |||||||| || || ||| ||||||||||||| Sbjct 8322 TAAAAAGTTGAAAACAAATCCATACGATAGAAGAATTATCATGTCGGCATGGAATCC 8266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578370504020