Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq212 268 9e-67 >seq212 Length=365203 Score = 268 bits (296), Expect = 9e-67 Identities = 583/860 (68%), Gaps = 21/860 (2%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || ||||||||||| ||||| |||||||| || || || | | || || ||| Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058 Query 13641 TCCATAAAATCAAATGGATT--TATTGACATAAACACTTTATCACAACCTAGTTCTAATA 13698 |||||||| || ||||| || || | ||||| |||| | | |||| | | || Sbjct 283059 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAAC-CTTTTTGTTA-CCTAAGGCAACTA 283116 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13758 |||||||||||||| || |||| |||||| ||||||| | ||| |||||||||| || Sbjct 283117 ATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATA 283176 Query 13759 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAA 13818 | | || | || |||||||||||||| |||| || || || | |||| Sbjct 283177 ATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATAA 283236 Query 13819 TAATTGTAATAATCTCATTAGAAGGAGGA-TATTTTAGATGTTTAAAAAT--TAAACACG 13875 | || || ||| | ||| || | |||| | || | ||| ||| || | Sbjct 283237 TTCTTTCAACAATAACT---GAATCTGGTCTGTTTTGTAAGTGAGAGAATAATAAGCATG 283293 Query 13876 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13935 | |||||| ||| | || ||||| | || || | |||||| || || ||||| || | Sbjct 283294 CGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCAG 283353 Query 13936 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTC 13995 |||| || |||| || |||||||| || || | ||||||||| || ||||| || | Sbjct 283354 GCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATAC 283413 Query 13996 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCC 14055 | ||||| || || || || | ||||| ||| || || | || | | | |||| Sbjct 283414 CTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGATCC 283473 Query 14056 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14115 || || |||||| |||| || || || ||| | || | || |||||||| |||| Sbjct 283474 ATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAATA 283533 Query 14116 AATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14173 | | || |||| |||| | ||| | |||| || ||||||||||| || |||| Sbjct 283534 AGAAGTCTGCTTC-CTTTGGATCTTTGA-TGTAAGTGTCAATAAGTAACGAGTAGGTTTC 283591 Query 14174 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTG 14233 |||||| ||||||||||| || || ||||| || || ||| | ||||| | ||| Sbjct 283592 AGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTG 283651 Query 14234 TACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14293 ||||| | | || |||| |||| ||||| || || ||||| ||| ||| ||||| Sbjct 283652 AACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAA 283711 Query 14294 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT---TTCCAATC 14350 |||||||| || | || |||||| || | ||||| | |||| ||||| || Sbjct 283712 GAATGCCAAGATTCTAGAGATGAAGTATCTTTCGTTGTTGTTTAATTTTTCATTCCAGTC 283771 Query 14351 GGATAA--ATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTT 14408 || | ||||||| | ||| | ||| || | ||||| || ||| |||| || Sbjct 283772 --ATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTC 283829 Query 14409 TTATACATTACCCATATTTC 14428 || |||||| ||| ||||| Sbjct 283830 TTGTACATTTGCCAGATTTC 283849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479725337509600