Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq212 279 5e-70 >seq212 Length=365203 Score = 279 bits (308), Expect = 5e-70 Identities = 584/858 (68%), Gaps = 17/858 (2%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||||||||||| ||||| || ||||| || || || | | || || ||| Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058 Query 13429 TCCATAAAATCGAATGGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATA 13486 |||||||| |||||||| || || | ||||| |||| | | |||| | | || Sbjct 283059 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAAC-CTTTTTGTTA-CCTAAGGCAACTA 283116 Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546 ||||||||||||||| || |||| |||||| ||||||| | ||| |||||||||| || Sbjct 283117 ATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATA 283176 Query 13547 GTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606 | | || | || | |||||||||||||| |||| || || || | |||| Sbjct 283177 ATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATAA 283236 Query 13607 TAATCTTAATAATGTCATTAGAAGGAGGA-TATTTTAGATGTTTAAAAAT--TAAACACG 13663 | | | || ||| | ||| || | |||| | || | ||| ||| || | Sbjct 283237 TTCTTTCAACAATAACT---GAATCTGGTCTGTTTTGTAAGTGAGAGAATAATAAGCATG 283293 Query 13664 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13723 | |||||| ||| | || ||||| | || || | |||||| || || ||||| || | Sbjct 283294 CGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCAG 283353 Query 13724 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 13783 |||| || |||| || |||||||| || || | ||| ||||| || ||||| || | Sbjct 283354 GCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATAC 283413 Query 13784 CCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCC 13843 | ||||| || || || || | || || ||| || || | || | | | |||| Sbjct 283414 CTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGATCC 283473 Query 13844 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATA 13903 || || |||||| |||| || || || ||| | || | ||||| |||||||||| Sbjct 283474 ATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAATA 283533 Query 13904 A-ATGT-TCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 13961 | | || | |||| |||| | ||| | |||| || ||||||||||| || |||| Sbjct 283534 AGAAGTCTGCTTC-CTTTGGATCTTTGA-TGTAAGTGTCAATAAGTAACGAGTAGGTTTC 283591 Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14021 |||||| |||||||| || || || ||||| || |||||| | ||||||| ||| Sbjct 283592 AGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTG 283651 Query 14022 TACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081 || || | | || |||| |||||||||| || |||||||| ||| ||| ||||| Sbjct 283652 AACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAA 283711 Query 14082 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT---TTCCAATC 14138 |||||||| || | || |||||| || | ||||| | |||| ||||| || Sbjct 283712 GAATGCCAAGATTCTAGAGATGAAGTATCTTTCGTTGTTGTTTAATTTTTCATTCCAGTC 283771 Query 14139 GGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTT 14198 ||||||| | ||| | ||| || | ||||| || ||| |||| || || Sbjct 283772 ATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTT 283831 Query 14199 ATACATTACCCATATTTC 14216 |||||| ||| ||||| Sbjct 283832 GTACATTTGCCAGATTTC 283849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478586143832160