Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq11 93.3 3e-14 >seq11 Length=459 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 ||| || |||||||| | ||| || ||||| | |||||||| || || || | | Sbjct 242 TCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACC 301 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 ||| || ||||| || ||||| |||||||||| ||||| || | || | |||||| || Sbjct 302 GTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 361 Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073 || ||| ||||| || ||| || || || ||||| |||| || || Sbjct 362 GTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGAT 421 Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||| || || || | ||| || |||||||||||||| Sbjct 422 AGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | |||||||| || || || | |||| || ||||| || ||||| ||| Sbjct 39 TCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAA 98 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 ||||||| ||||| || | || | |||||| || || ||| ||||| || Sbjct 99 ATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 158 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| || || || ||||| |||| || ||||| || || || | ||| || ||| Sbjct 159 TCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACA 218 Query 43099 AAAATTTGCAT 43109 ||||||||||| Sbjct 219 AAAATTTGCAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367536313752