Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq212 416 4e-111 seq387 95.1 2e-14 >seq212 Length=365203 Score = 416 bits (460), Expect = 4e-111 Identities = 1466/2277 (64%), Gaps = 39/2277 (2%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 ||||||||||| | || | || |||| || | || || ||||| ||||| |||| | Sbjct 167012 GTAAACTGAATAGCAGCAGCAGCAGCTTGAGTTCTTAAGTAATACATACCTGTCTTTAAA 167071 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || |||| || || |||||||| |||| || |||| | || || || Sbjct 167072 CCCTTCTTCCAACCATAGAAATGCATTGAAGTTAACTTACCCATAGTTGGG-TCTTTGAT 167130 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 ||||||||| | || || |||||| ||||| || | |||||||||||||| | || Sbjct 167131 GTGAATATTTAAAGATTGTGATTGATCAATGAATGCAGCTCTGTCTGCAGCCATGTCAAT 167190 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 71038 || |||||| | ||||||||||| || || || || | ||||| || ||||||| Sbjct 167191 AATATGCTTTTGGGAAATTTCCCAAACGGTCTTGTATAAGGCCTTTAAT-TCATCTGGAA 167249 Query 71039 GGTTTGT-----ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTC 71093 ||| | ||| |||| ||||| || | ||||| | || || || || || Sbjct 167250 TGTTAGGCAAGGATT--GAATAGATCCGTTATTAGAGATAATATTGTTCTTCATATCATC 167307 Query 71094 ATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTC 71153 |||||| | | || |||| | | | | | || || || | ||| ||||| Sbjct 167308 ATTCCAGATACCTAAATCAACTAAATCACGCAATAAGTATGGGTTGACAATTTGGAATTC 167367 Query 71154 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATT 71213 |||| ||| ||||| | | ||||||||| ||||| || || | | ||||| | Sbjct 167368 ACCAGCCAAAACTCTTCTGGAGTAAATATTTGAAGTATATGGCTCGAAGCATTCATTGTA 167427 Query 71214 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAG 71273 ||||| ||||||| |||||| ||||| ||||| || || || || | | ||||||||| Sbjct 167428 ACCCAAGATTTGAGAAGTTGAGGCAGTTGGCATTGGAGCAACTAACAAAGAATTTCTAAG 167487 Query 71274 ACCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAA 71332 |||||| | | | | ||| | ||| | || ||||| | ||| | || | |||| Sbjct 167488 ACCATGCTTAGCTAACTTT-TGTTTCAAAGTATCCCAGTCCCATAATTCAGTTGGTTTTC 167546 Query 71333 CNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGT 71392 || || ||| ||| ||||| |||| || | || Sbjct 167547 TATCCCATAAATCAAATTGTAAGATACCCTTAGAAGCTGGAGATCCCTCATAGGTTTGGT 167606 Query 71393 ATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTT 71452 |||||||||| ||| |||| ||| || || | || || | |||||| || | Sbjct 167607 ATGGTCCTTCAACTTCAGCTAACTCAATGGATGCTTCGACAGCACCGTGATAAATAGTCT 167666 Query 71453 CGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT-TTAAGAGA 71511 ||||||| | |||| | || | ||||| || |||||||| |||| |||| Sbjct 167667 CGAAAATTTGAGTATTTAATTCCTTAGCTTCTTGGGAGTCAAATGG-TAATCTTAATGCC 167725 Query 71512 ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAA 71571 |||||||| |||||||| ||||| || || | | || ||||||| |||| |||| || Sbjct 167726 ATAAACGCATCTGCTAAACCTTGGACACCTAAGGCAATTGGTCTGTTTCTCATATTGGAG 167785 Query 71572 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACT 71631 || |||||||||| || || | ||| || |||||| | || | || | | Sbjct 167786 TTTCTTGCTTCTGGAACTGGGTAGAAGTTACGGTCAATAATTCTGTTCAAGTTACGGGTC 167845 Query 71632 ATTACTTTGACCACATCCTTTAGTTTGAGAAAATC-----AAAT-------CTC-CCATC 71678 | || || || || | || || |||||| || | || || || Sbjct 167846 ACAACCTTAGTAACTTCATGTAACTTTTCAAAATCGTACCAACTTGAGGTACTGTCCTTC 167905 Query 71679 TATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 71738 | ||||| | ||| || | || || | |||||||| || || |||| | | | Sbjct 167906 TCA-ACAAAAGAGGGCAAAGCGATGGAAGCTAAGTTACAAACAGCAACTTCATCGGGAGC 167964 Query 71739 GGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTG 71798 | |||| | ||||||| || | || |||| || | |||||||| | ||| Sbjct 167965 AGAGTATTCAACAATTTCACAACATAAGTTGGATGACTTAATAATACCTAAATTCTTTTG 168024 Query 71799 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTG 71858 || | ||||||||||| ||||| || || | || || || |||||||||||| | || Sbjct 168025 GTTTGTTTTTTTGTTACAAGCATCTTTGTATAACATGAATGGTGTACCAGTTTCAGTTTG 168084 Query 71859 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTATCTCTTTT 71917 || |||| ||| || | ||| | | ||||| | | ||| | | |||| Sbjct 168085 AGCATCTAAAATGGCGTACCATAATTTCTGCGCCTTAACAACCGATCTACCA-CGATTTT 168143 Query 71918 CTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAG 71977 || |||| |||| | || ||| |||||| || || || | ||| ||| |||| Sbjct 168144 CTTTTTCATATTTGGAGTACAATTCTTCGAATTCATCACCGTAGACATCTGATAAACCAG 168203 Query 71978 GACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGA 72037 || |||||| ||| | | ||| | ||| ||||||| | | |||| ||||| || | Sbjct 168204 GAGCTTCATTTGGAGAGAACAAAGTCCAGTCTCCATTTTGTTCGACTCTCTTCATGAATA 168263 Query 72038 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 72097 |||||||||||| | || |||| ||||| | ||| || || || || || Sbjct 168264 AATCAGGAATCCATAAGGCAGGGAATAAGTCTCTAGCTCTGATTTCTTCCTTACCATGAT 168323 Query 72098 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 72157 ||||| | | ||| | ||| | | ||||| | |||||| || || ||||| | ||| | Sbjct 168324 TCTTTCTTATATCTATGAAATCAAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAA 168383 Query 72158 TAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 72217 | || || | ||||| || || ||||| | || | ||| ||||| ||| |||| | Sbjct 168384 AGGCGCCTGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACAC 168443 Query 72218 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 72277 | ||| ||||| |||||||| || | |||||| || || | || || ||| | | Sbjct 168444 GTACCATAGGAATGATACCATTAGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTAG 168503 Query 72278 CACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 72337 |||||| ||| || || ||| || || || || | || || || || || ||| Sbjct 168504 AACGAATGTTGTGGATATGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATG 168563 Query 72338 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 72397 || || ||||| ||||| || || ||| || || |||| || | ||||| Sbjct 168564 TCTTCAAGGTATCGTAGATACCATCGATAGAGTCTTCTTTCATAGCAACCAAGAAACAAG 168623 Query 72398 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 72457 |||||| || | | | ||| || || || ||||| || || ||| |||| || || Sbjct 168624 AAGACATCTGAGGGCTAGGAGTACCAGCGTTGAATAAAGTTGGGGAACCGTGAGTGAAAA 168683 Query 72458 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTC 72517 || ||| |||| | ||||||| || ||| || ||| || || ||| |||| Sbjct 168684 ATCTTTGGGACATCATGTTGTACGATTCGATAACTCTTTCGATGTCATCACCATGGATTC 168743 Query 72518 CTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 72577 | || ||||| | ||| | || |||||| |||||||| | | ||| ||| ||| ||| Sbjct 168744 CGACTGCGACTCTCATAATCAAATGCTGTGGTCTTTCGGCAACCTTACCATTAATTCTCA 168803 Query 72578 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 72635 | ||||| ||| ||||||| || || || |||||||||||||| ||||| || || || Sbjct 168804 ATAAGTAAGATCTTTCCAAGGTCTTGAATCCAAAATAGTTGTAGTTGAAA--TCACGATC 168861 Query 72636 GTAAATAATAACCGAATTGAGTTTATCCTTATATTTG--TTAACTATATCCATGGTGATA 72693 | | |||| | || || | | || || ||| | | || ||||| ||| Sbjct 168862 AAACACAATAGCAGAGTTCAACTCAT--TTGAATTGGCTTGAATAATATCGTATGTGTCT 168919 Query 72694 CTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCC 72753 | ||||| || || || ||| ||| | || || |||||||| | | || |||| Sbjct 168920 TTGGAAATCATAGGTGAGTGTAAACCAGTCTTTGGGTTAACATATTCATACAACTCCTTA 168979 Query 72754 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCG 72813 | |||| | ||| | || | |||| |||||||| || || ||||| ||||| || Sbjct 168980 CTGACTTGAGAGAATTGCTTGGTAGTTTGCTTGTGTAAGTTGGAAACGGCGATTCTTGCT 169039 Query 72814 GCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGA 72873 || | ||| || || || || || |||||| | || || |||| || |||| Sbjct 169040 GCCAAAATAGCGTAGTCAGGGTGGATTGTAGTCATATAAGCAGCAGTTTCAGCAGCCAAG 169099 Query 72874 GTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATT 72933 | || ||||| | || | || || | || | || |||||| || | || Sbjct 169100 TTATCTAATTCAATAGTGTTGACCCCTTGGTAAACACCAGAAATAACCCTCTGTGTGATA 169159 Query 72934 TTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTG 72993 || || || | || |||||| ||| |||||||||||| || || | || ||| Sbjct 169160 GCAACTGGTTCGACGTGTGCAGTGTCTAACCCATAACATAATCTTTGAACTCTAGCAGTG 169219 Query 72994 ATTTTATCAAACATAACATTTTCCCGGCATCCATTTCGTTTAACGACAAACATTTTT 73050 || || ||||| ||| ||| | ||||| || |||| ||| ||||| || Sbjct 169220 ATCTTGTCAAAGCGGACAGGCTCCTTACGTCCATCTCTTTTATAAACATACATTATT 169276 Score = 279 bits (308), Expect = 7e-70 Identities = 600/887 (68%), Gaps = 24/887 (3%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| |||| || | |||||||| || || |||||||| | || || || ||| Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || || |||||||| || |||| ||||| || || || | Sbjct 283059 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACCTTTTTGTTACCTAAGGCAACTAAT 283118 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 |||||||| || | |||||| | ||| ||| | | ||| ||||| |||| | | Sbjct 283119 AATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAAT 283178 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 | ||| | ||| || | |||||||| ||| |||| || || || || ||||| Sbjct 283179 GAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATAAT- 283237 Query 42014 GATCTT---ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 42070 |||| || | || | ||| | ||| || || | || |||||| Sbjct 283238 --TCTTTCAACAATAACTGAATCTGGTCTGTTTTGTAAGTGAGAGAATAATAAGCATGCG 283295 Query 42071 AAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 42130 ||||| || | ||| ||||| | || |||||||||||||| || || | || ||| Sbjct 283296 AAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCAGGC 283355 Query 42131 ATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCT 42190 |||| || | ||| || | ||| || ||||| |||||||| ||| ||||| || ||| Sbjct 283356 ATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATACCT 283415 Query 42191 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCACTGTCATGTATCCAC 42247 || || || || ||||||| | ||| || || ||||| | || ||| ||||| Sbjct 283416 TCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGATCCAT 283475 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 || ||||||||| |||||||| || | ||| || || | || || ||||| || | Sbjct 283476 CTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAATAAG 283535 Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA-TACATTTCTGA 42366 ||| | ||| || |||||| | || || || || || || | || |||| || Sbjct 283536 AAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAAT-AAGTAACGAGTAGGTTTCAGA 283594 Query 42367 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC 42426 || |||||||| || || || || |||||||||||| |||| || | || || || Sbjct 283595 GTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTGAAC 283654 Query 42427 TTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486 ||| | | | || |||| | || |||||||| || || |||||| || ||||| || Sbjct 283655 TTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAGAA 283714 Query 42487 CGCCAATACATGTTTT----ATAAAATATTTTTCGTCCGGTG-TTAATTT---ATTCCAA 42538 ||||| | || | || || ||| |||||| | || ||||||| |||||| Sbjct 283715 TGCCAAGA----TTCTAGAGATGAAGTATCTTTCGT-TGTTGTTTAATTTTTCATTCCAG 283769 Query 42539 TCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598 |||| |||| ||| || ||| | |||||| | ||||| || || ||||| ||||| Sbjct 283770 TCATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTC 283829 Query 42599 TTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || ||||| | |||||| || || |||| |||||||| | ||| || Sbjct 283830 TTGTACATTTGCCAGATTTCGTGGTATTTGATTGGGAATAAAACGAA 283876 >seq387 Length=274674 Score = 95.1 bits (104), Expect = 2e-14 Identities = 299/462 (65%), Gaps = 11/462 (2%) Strand=Plus/Plus Query 70822 GCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAA 70881 || |||| || | |||||| ||||| || ||||| | || ||| | || ||| Sbjct 210002 GCAGCTTGTGTCCTTAGATAATACATACCAGTTTTCAAGCCTTTTTCCCAGGCATAGAAA 210061 Query 70882 TGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTT 70941 || | || |||| ||| | || | ||||| || | ||||||||| || Sbjct 210062 TGACTGCTTGTTAATTTACCAAAGGTTGGATCCTGTAAATAAATATTCATACTTTGCAGC 210121 Query 70942 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 71001 || || ||||| ||| || || || || | | || ||| ||||| | ||||||| Sbjct 210122 TGGTCAATGAATTTTCCTCTATCAGCTGCTAGATCAATAATCACTTTTTGAGAAATTTCC 210181 Query 71002 CAAATAGTTTTATAAACTCGCTTAATATCTTCTGG---AAGGTTTGTATTCTGAATGGAT 71058 |||| |||||||||| | |||| | || | ||| || | | | || ||||| ||| Sbjct 210182 CAAACTGTTTTATAAAGTTGCTTCAATTCATTTGGTATAACGGGTATGTTTTGAATCGAT 210241 Query 71059 CCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAA 71118 || | ||| || || ||||| | || |||||| | | || ||||| Sbjct 210242 CCGCTTTCTAAGATTATTTTATTTCTCATAGAAGAATTCCAGATACCTAGGTCAATTAAA 210301 Query 71119 ACTCT----AAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGT 71174 | | ||| | || || |||||||||||||||||||| ||||| || || | Sbjct 210302 TCCTTCATCAAGTATTTG----TTCACTACTTGAAATTCTCCAGATAATACCCTTCGGTT 210357 Query 71175 GTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGA 71234 || |||||| || || ||||| | | |||||| || ||||| |||| ||||| Sbjct 210358 ATATATATTAGATGTGTAAGGTTCAAAACATTCATTAAACCCTAAAATCTGAGATGTTGA 210417 Query 71235 TGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACC 71276 ||||| ||||| ||||| || | || ||| |||| ||| Sbjct 210418 AGCAGTAGGCATTGGTGCAACTAGTAACGAATTCCTAACACC 210459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135475177440