Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq11 172 4e-38 seq315 161 7e-35 seq392 149 5e-31 seq277 109 4e-19 seq417 91.5 1e-13 >seq11 Length=459 Score = 172 bits (190), Expect = 4e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| ||||| ||||| | || || |||||||| ||||||||||| | Sbjct 231 CCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 290 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||||||||| || || ||| | ||||| | ||||||||| |||| Sbjct 291 AAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 350 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| ||| ||| ||| | || || ||||| | ||| || Sbjct 351 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACT 410 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||||| || || |||||||||| ||| || ||||||||||||||| Sbjct 411 TCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCATA 458 Score = 159 bits (176), Expect = 3e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| |||||||| || | || || |||||||| ||||||||||| | Sbjct 3 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 62 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| |||| |||||||| || || ||| | ||||| | ||||||||| ||| Sbjct 63 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 122 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| ||| ||| || | || || ||||| | ||| || Sbjct 123 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGACT 182 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||||| || || |||||||||| ||| || ||||||||||||||| Sbjct 183 TCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCATA 230 >seq315 Length=97186 Score = 161 bits (178), Expect = 7e-35 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 |||||||| || | || || |||||||| ||||||||||| || |||| |||| Sbjct 3 AAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCC 62 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 |||||||| || || ||| | ||||| | ||||||||| |||||| ||||| ||||| Sbjct 63 TCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCT 122 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||| ||| ||| ||| | || || |||||| | ||| || |||||||||||||| Sbjct 123 TGAATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTC 182 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAAT 15373 |||||||||| ||||| || || |||||||||||| |||| Sbjct 183 TTACCTGTCAATGTTTTAACGAAGATTTGCATATTTATAAAT 224 >seq392 Length=124811 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| |||||||| ||||| || | |||||| || ||||| ||||||||||| | Sbjct 104801 CCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGAT 104860 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | ||||||||||| || |||||| | || || | ||||||||| |||| Sbjct 104861 AAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGA 104920 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| || || ||| || | || || || || | ||| || Sbjct 104921 ATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAACT 104980 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 |||||||||||||| ||||| || | ||| || || ||||||||||| || Sbjct 104981 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105030 >seq277 Length=184381 Score = 109 bits (120), Expect = 4e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| |||||||| || | || || |||||||| ||||||||||| | Sbjct 153 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 94 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| |||| |||||||| || || ||| | ||||| | ||||||||| |||| Sbjct 93 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 34 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACA 15289 || ||||| ||||| ||| ||| ||| ||| Sbjct 33 ATACCTTCCTTGTCTTGAATCTTGGACTTGACA 1 >seq417 Length=227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| |||||||| || | || || |||||||| ||||||||||| | Sbjct 112 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 171 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTC 15249 | |||| |||| |||||||| || || ||| | ||||| | ||||||||| Sbjct 172 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTC 224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 15254 GGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 ||||| ||||| ||||| ||| ||| ||| ||| | || || ||||| | ||| Sbjct 1 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 60 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||||||| || || |||||||||| ||| || ||||||||||||||| Sbjct 61 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCATA 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362177240157804