Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq212 226 2e-54 >seq212 Length=365203 Score = 226 bits (250), Expect = 2e-54 Identities = 567/850 (67%), Gaps = 25/850 (3%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || || |||||||| ||||| || ||||| || ||||| |||| ||||| ||| Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTTTTACACCCTAATTCTAGT 12976 |||||||| ||||| || || | ||| | ||| ||||| ||||| | | | Sbjct 283059 TCCATAAAGTCGAATGGGTTGGT--AAC-GTTGTAAACCTTTTTGTTACCTAAGGCAACT 283115 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 || ||||| |||||||| || || | ||| || |||||| | ||||||||| |||| | Sbjct 283116 AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAAT 283175 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTC---GATA 13093 ||| | || | ||| || ||||| | |||||| ||| ||||||||| |||| Sbjct 283176 AATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATA 283235 Query 13094 ACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACAT 13153 | | | || || || || ||| ||| || || || | | ||| Sbjct 283236 ATTCTTTCAACAATAACTGAATC---TGGTCTGTTTTGTAAGTGAGAGAATAATAAGCAT 283292 Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213 || |||||| || || |||||||| | || |||| ||||| || || |||| ||| Sbjct 283293 GCGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCA 283352 Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAAC--CCGaaaaaaaTA 13271 ||||| | |||| || || | ||| || |||| |||||| |||| | ||| |||||| Sbjct 283353 GGCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATA 283412 Query 13272 TTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACC--AT-ACGTACTATTTTTACTCT 13328 |||||||| ||||| || || | || ||||| || || ||| | || | ||| Sbjct 283413 --CCTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACT-- 283468 Query 13329 CTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGT 13388 ||||| || ||||| | || || | || | || || || || || || | Sbjct 283469 -GATCCATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCAT 283527 Query 13389 TAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACA 13448 | ||||| | | | |||||| ||| || ||||| || || | ||| || Sbjct 283528 TGAATAAGAAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAATAAGTAACGAGTAGG 283587 Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508 |||| || || || ||||||||| ||||||||||| || |||||| | || |||| | Sbjct 283588 TTTCAGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAA 283647 Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568 |||||||| | | || |||| | ||||||||||| || || |||||| ||||| Sbjct 283648 TTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAG 283707 Query 13569 CaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTT-TTCTGACAACTTTAA--CC 13625 |||| || || | || || || | | ||||||| || | | ||| | || Sbjct 283708 CAAAGAATGCCAAGATTCTAGAGATGAAGTATCTTTCGTTGTTGTTTAATTTTTCATTCC 283767 Query 13626 AATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685 | || || ||| || |||||| | || || | ||||| || ||||| |||||| Sbjct 283768 AGTCATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCT 283827 Query 13686 TCTTATACAT 13695 |||| ||||| Sbjct 283828 TCTTGTACAT 283837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430980067846488