Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq212 214 4e-50
seq11 154 3e-32
seq315 150 4e-31
seq392 138 3e-27
seq277 109 1e-18
seq417 84.2 5e-11
>seq212
Length=365203
Score = 214 bits (236), Expect = 4e-50
Identities = 582/873 (67%), Gaps = 45/873 (5%)
Strand=Plus/Minus
Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801
|||||||| |||| | ||||| || ||||||| |||||| | ||| | | | ||
Sbjct 283837 ATGTACAAGAAGGCTGAAGCTTCCTTCTGGACTGCCGAAGAAATCGATTTAGGTAAGGAT 283778
Query 268802 T-TAATAGATTGGAA--AAATTTAAAACCAGAA-GAAAGAAGATTTATATCTTATATTCT 268857
| || || ||||| ||| | |||| | || |||||| || || ||| | | |||
Sbjct 283777 ACTCAT-GACTGGAATGAAAAATTAAACAACAACGAAAGATACTTCATCTCT-AGAATCT 283720
Query 268858 TG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTC 268916
|| | || ||||| | | ||| ||||| || |||||||| | || || || |||| |
Sbjct 283719 TGGCATTCTTTGCTGCTTCTGACGGTATTGTCAACGAAAACTTGGTTGAAAACTTCTCTG 283660
Query 268917 AAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATA 268976
|| || || ||||| ||||||| |||||| ||||| ||||| || || ||||| |
Sbjct 283659 CTGAAGTTCAAATTCCAGAAGCCAAATGTTTCTACGGTTTCCAAATTATGATGGAAAACA 283600
Query 268977 TTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGA 269036
| || || || | ||| || | || || ||||| || | ||| | ||| ||
Sbjct 283599 TCCACTCTGAAACCTACTCGTTACTTATTGACACTTACATCAAAGAT-----CCAAAGGA 283545
Query 269037 AA-AGACTATTTTCTTCTATGAGAACTATGGAC---------TGTGTGAGaaaaaaaTCT 269086
| ||||| | || ||| ||| |||| ||| ||| | | || || ||
Sbjct 283544 AGCAGACT-TCTTATTCAATG----CTATCGACAACATCCCATGTATCAAGAAGAAGGCT 283490
Query 269087 GAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTTGCT 269143
|| |||||| | | |||||| | ||| | || ||| ||| ||||| ||||||||
Sbjct 283489 GATTGGGCTTTAAGATGGATCAGTGATGATGATGCGTTATTCGGCGAAAGATTAGTTGCC 283430
Query 269144 TTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAG 269203
|| || ||||| |||||||| ||||| || || ||||| |||| || ||||| |||
Sbjct 283429 TTCGCAGCTGTTGAAGGTATTTTCTTCAGTGGTTCATTTGCTTCTATTTTCTGGTTAAAG 283370
Query 269204 AAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGT 269263
|| ||||| | ||||| || ||||| ||||| |||||||| || | | || ||||||
Sbjct 283369 AAGAGAGGTTTAATGCCTGGTTTAACCTTCTCCAACGAATTAATCTGTCGTGATGAAGGT 283310
Query 269264 TTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTC-ACACAAACCTTCTCA 269322
||||| || ||||| || |||||||| || | ||| | | ||| ||| |
Sbjct 283309 TTACATACTGATTTCGCATGCTTATTATTCTCTCA----CTTACAAAACAGACCAGATTC 283254
Query 269323 AGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGA 269382
|| || || | |||||| | ||| ||| || | |||| ||||||| | ||
Sbjct 283253 AGTTATTGTTGAAAGAATTATCACTGAAGCAGTTACTATCGAAAAAGAATTTTTCGTTGA 283194
Query 269383 AGCTCTATCTATCGATC-TTA-TCGGTATGAATAGCAAATCGATGATAGAATATATTAAG 269440
||| || | ||| || ||| | |||||||| | || | ||| |||| || |
Sbjct 283193 TGCTTTACCAATC--TCATTATTAGGTATGAACTGTAACTTAATGTGTCAATACGTTGAA 283136
Query 269441 TTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAA---ATATAACGTTGAA 269497
||||| |||||||||| | || | ||||| || ||||| || ||||||
Sbjct 283135 TTCGTTGCTGATAGATTATTAGTTGCCTTAGG---TAACAAAAAGGTTTACAACGTTACC 283079
Query 269498 AATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAG 269557
|| || || |||||||| || || || |||| || ||| | || |||||||| |||
Sbjct 283078 AACCCATTCGACTTTATGGAAAACATTTCTTTAGCCGGAAAGACCAACTTCTTCGAAAAG 283019
Query 269558 CGGGTAAGTAACTATCAGAAAATGGGTGTAATG 269590
| || ||| |||| || || ||||| |||
Sbjct 283018 AGAGTTAGTGACTACCAAAAGGCCGGTGTCATG 282986
>seq11
Length=459
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | |||||| ||||||||||| ||||| || || |||
Sbjct 228 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCA 287
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| |||||||||||||||| ||| || || || ||||| | || ||||| || ||
Sbjct 288 GATAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGT 347
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||| | || ||||| || | ||||| || |||
Sbjct 348 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 407
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||| || ||||||||||| || | || || ||||| || |||||
Sbjct 408 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457
Score = 143 bits (158), Expect = 6e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | |||| || || ||||||||||| ||||| || || ||||||
Sbjct 3 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 62
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| ||||||||||| |||| ||| || || || ||||| | || ||||| || |||||
Sbjct 63 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 122
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || |||||||| | || || || || | ||||| || ||| ||
Sbjct 123 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGACT 182
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||| || ||||||||||| || | || || ||||| || |||||
Sbjct 183 TCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229
>seq315
Length=97186
Score = 150 bits (166), Expect = 4e-31
Identities = 175/235 (74%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|||| || || ||||||||||| ||||| || || ||||||| ||||||||||| |||
Sbjct 6 ACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCT 65
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
| ||| || || || ||||| | || ||||| || || || || ||||| || || |||
Sbjct 66 AATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 125
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||| | || ||||| || | |||||| || ||| || |||| ||||| ||||||
Sbjct 126 ATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTA 185
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACAGTATTTATTAGAGTAA 104585
|| || | |||||| || || || ||||| || | || | | |||||| | |||
Sbjct 186 CCTGTCAATGTTTTAACGAAGATTTGCATATT-TATAAATTGATTATTAAATTAA 239
>seq392
Length=124811
Score = 138 bits (152), Expect = 3e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | |||| || || || ||||| || ||||| || || ||||||
Sbjct 104801 CCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGAT 104860
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||||||| ||||||| ||| || ||||| || |||| || ||||| ||||| ||
Sbjct 104861 AAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGA 104920
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || || ||||| | || || || || | || || || ||| ||
Sbjct 104921 ATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAACT 104980
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|||| ||||| ||||||||||| | || || || || || |||||||||
Sbjct 104981 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 105031
>seq277
Length=184381
Score = 109 bits (120), Expect = 1e-18
Identities = 116/152 (76%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 104326 ATTTATT--CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383
||||||| || ||||||| || | |||| || || ||||||||||| ||||| ||
Sbjct 162 ATTTATTGACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTG 103
Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443
|| ||||||| ||||||||||| |||| ||| || || || ||||| | || |||||
Sbjct 102 TAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGG 43
Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475
|| || || || ||||| || || ||||||||
Sbjct 42 TCTGGTGGAATACCTTCCTTGTCTTGAATCTT 11
>seq417
Length=227
Score = 84.2 bits (92), Expect = 5e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | |||| || || ||||||||||| ||||| || || |||
Sbjct 109 ATACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCA 168
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGG 104448
|||| ||||||||||| |||| ||| || || || ||||| | || ||||| || ||
Sbjct 169 GATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGG 227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151391849982352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |