Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq212 214 4e-50 seq11 154 3e-32 seq315 150 4e-31 seq392 138 3e-27 seq277 109 1e-18 seq417 84.2 5e-11 >seq212 Length=365203 Score = 214 bits (236), Expect = 4e-50 Identities = 582/873 (67%), Gaps = 45/873 (5%) Strand=Plus/Minus Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801 |||||||| |||| | ||||| || ||||||| |||||| | ||| | | | || Sbjct 283837 ATGTACAAGAAGGCTGAAGCTTCCTTCTGGACTGCCGAAGAAATCGATTTAGGTAAGGAT 283778 Query 268802 T-TAATAGATTGGAA--AAATTTAAAACCAGAA-GAAAGAAGATTTATATCTTATATTCT 268857 | || || ||||| ||| | |||| | || |||||| || || ||| | | ||| Sbjct 283777 ACTCAT-GACTGGAATGAAAAATTAAACAACAACGAAAGATACTTCATCTCT-AGAATCT 283720 Query 268858 TG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTC 268916 || | || ||||| | | ||| ||||| || |||||||| | || || || |||| | Sbjct 283719 TGGCATTCTTTGCTGCTTCTGACGGTATTGTCAACGAAAACTTGGTTGAAAACTTCTCTG 283660 Query 268917 AAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATA 268976 || || || ||||| ||||||| |||||| ||||| ||||| || || ||||| | Sbjct 283659 CTGAAGTTCAAATTCCAGAAGCCAAATGTTTCTACGGTTTCCAAATTATGATGGAAAACA 283600 Query 268977 TTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGA 269036 | || || || | ||| || | || || ||||| || | ||| | ||| || Sbjct 283599 TCCACTCTGAAACCTACTCGTTACTTATTGACACTTACATCAAAGAT-----CCAAAGGA 283545 Query 269037 AA-AGACTATTTTCTTCTATGAGAACTATGGAC---------TGTGTGAGaaaaaaaTCT 269086 | ||||| | || ||| ||| |||| ||| ||| | | || || || Sbjct 283544 AGCAGACT-TCTTATTCAATG----CTATCGACAACATCCCATGTATCAAGAAGAAGGCT 283490 Query 269087 GAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTTGCT 269143 || |||||| | | |||||| | ||| | || ||| ||| ||||| |||||||| Sbjct 283489 GATTGGGCTTTAAGATGGATCAGTGATGATGATGCGTTATTCGGCGAAAGATTAGTTGCC 283430 Query 269144 TTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAG 269203 || || ||||| |||||||| ||||| || || ||||| |||| || ||||| ||| Sbjct 283429 TTCGCAGCTGTTGAAGGTATTTTCTTCAGTGGTTCATTTGCTTCTATTTTCTGGTTAAAG 283370 Query 269204 AAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGT 269263 || ||||| | ||||| || ||||| ||||| |||||||| || | | || |||||| Sbjct 283369 AAGAGAGGTTTAATGCCTGGTTTAACCTTCTCCAACGAATTAATCTGTCGTGATGAAGGT 283310 Query 269264 TTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTC-ACACAAACCTTCTCA 269322 ||||| || ||||| || |||||||| || | ||| | | ||| ||| | Sbjct 283309 TTACATACTGATTTCGCATGCTTATTATTCTCTCA----CTTACAAAACAGACCAGATTC 283254 Query 269323 AGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGA 269382 || || || | |||||| | ||| ||| || | |||| ||||||| | || Sbjct 283253 AGTTATTGTTGAAAGAATTATCACTGAAGCAGTTACTATCGAAAAAGAATTTTTCGTTGA 283194 Query 269383 AGCTCTATCTATCGATC-TTA-TCGGTATGAATAGCAAATCGATGATAGAATATATTAAG 269440 ||| || | ||| || ||| | |||||||| | || | ||| |||| || | Sbjct 283193 TGCTTTACCAATC--TCATTATTAGGTATGAACTGTAACTTAATGTGTCAATACGTTGAA 283136 Query 269441 TTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAA---ATATAACGTTGAA 269497 ||||| |||||||||| | || | ||||| || ||||| || |||||| Sbjct 283135 TTCGTTGCTGATAGATTATTAGTTGCCTTAGG---TAACAAAAAGGTTTACAACGTTACC 283079 Query 269498 AATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAG 269557 || || || |||||||| || || || |||| || ||| | || |||||||| ||| Sbjct 283078 AACCCATTCGACTTTATGGAAAACATTTCTTTAGCCGGAAAGACCAACTTCTTCGAAAAG 283019 Query 269558 CGGGTAAGTAACTATCAGAAAATGGGTGTAATG 269590 | || ||| |||| || || ||||| ||| Sbjct 283018 AGAGTTAGTGACTACCAAAAGGCCGGTGTCATG 282986 >seq11 Length=459 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | || | |||||| ||||||||||| ||||| || || ||| Sbjct 228 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCA 287 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| |||||||||||||||| ||| || || || ||||| | || ||||| || || Sbjct 288 GATAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGT 347 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || |||||||| | || ||||| || | ||||| || ||| Sbjct 348 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 407 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| || ||||||||||| || | || || ||||| || ||||| Sbjct 408 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | |||| || || ||||||||||| ||||| || || |||||| Sbjct 3 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 62 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||||||||| |||| ||| || || || ||||| | || ||||| || ||||| Sbjct 63 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 122 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || |||||||| | || || || || | ||||| || ||| || Sbjct 123 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGACT 182 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || ||||||||||| || | || || ||||| || ||||| Sbjct 183 TCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229 >seq315 Length=97186 Score = 150 bits (166), Expect = 4e-31 Identities = 175/235 (74%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 |||| || || ||||||||||| ||||| || || ||||||| ||||||||||| ||| Sbjct 6 ACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCT 65 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | ||| || || || ||||| | || ||||| || || || || ||||| || || ||| Sbjct 66 AATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 125 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| | || ||||| || | |||||| || ||| || |||| ||||| |||||| Sbjct 126 ATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTA 185 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACAGTATTTATTAGAGTAA 104585 || || | |||||| || || || ||||| || | || | | |||||| | ||| Sbjct 186 CCTGTCAATGTTTTAACGAAGATTTGCATATT-TATAAATTGATTATTAAATTAA 239 >seq392 Length=124811 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | |||| || || || ||||| || ||||| || || |||||| Sbjct 104801 CCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGAT 104860 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||||||| ||||||| ||| || ||||| || |||| || ||||| ||||| || Sbjct 104861 AAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGA 104920 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || || ||||| | || || || || | || || || ||| || Sbjct 104921 ATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAACT 104980 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 |||| ||||| ||||||||||| | || || || || || ||||||||| Sbjct 104981 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 105031 >seq277 Length=184381 Score = 109 bits (120), Expect = 1e-18 Identities = 116/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 104326 ATTTATT--CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383 ||||||| || ||||||| || | |||| || || ||||||||||| ||||| || Sbjct 162 ATTTATTGACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTG 103 Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 || ||||||| ||||||||||| |||| ||| || || || ||||| | || ||||| Sbjct 102 TAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGG 43 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 || || || || ||||| || || |||||||| Sbjct 42 TCTGGTGGAATACCTTCCTTGTCTTGAATCTT 11 >seq417 Length=227 Score = 84.2 bits (92), Expect = 5e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | |||| || || ||||||||||| ||||| || || ||| Sbjct 109 ATACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCA 168 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGG 104448 |||| ||||||||||| |||| ||| || || || ||||| | || ||||| || || Sbjct 169 GATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGG 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151391849982352