Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq144 152 6e-32 seq110 118 1e-21 >seq144 Length=22619 Score = 152 bits (168), Expect = 6e-32 Identities = 322/472 (68%), Gaps = 19/472 (4%) Strand=Plus/Plus Query 7009 TAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTC 7068 || ||||| || || ||||||||||| ||||| | || ||| | ||| | |||||| Sbjct 8212 TAGAATTGGCAGAAAACATGACATGGGGGTAAGGCCATCTTATCAAAATCTGGCGGATTC 8271 Query 7069 CAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATT 7128 || || | ||| | ||| | |||||| | |||||||||||| || ||| | |||| | Sbjct 8272 CATGCCGACATGATAATTCTTCTATCGTATGGATTTGTTTTCAACTTTTTAATAACATCT 8331 Query 7129 TGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCA 7188 ||||||||||| | || || || || | || | ||| | | || | || ||| Sbjct 8332 TGTAATTGATCAACTCCTTGTCCAGAGTAGTCTGTGTCACAGTCCTTGTACTCTGCCCCA 8391 Query 7189 AAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAAT 7248 ||||| ||||| ||||| || |||| ||||| |||||||| || ||| | || ||| Sbjct 8392 AAATGCCTCCACTGAAATCCGTAAACTGGACCCAAATCACCCTCGCGACGGTCTTTCAAT 8451 Query 7249 CCTAATCGATTTAAATTAGATT---TTGATCCATAAGCATCCCAAATATGTACAGAtttt 7305 |||| | || | || || || ||||||||| | |||||||| | ||| |||| Sbjct 8452 CCTA-TGGAGTCTAAGTA--TTCCCTTGATCCATTGCCTTCCCAAATTTTAACACCTTTT 8508 Query 7306 tttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTC--TACTA 7363 | ||| || ||| || || ||| |||||| | ||||| || | || | || || Sbjct 8509 TCTGACAATTTTTTAGCATCCGTACATCCTTGTACAAACCACAACAACTCATGAATAATA 8568 Query 7364 TTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAATGTA----CTTAAATCAT-- 7417 | || ||||| |||||| ||||| | ||| ||||||||| || | | | Sbjct 8569 GCTCTCGAAAAAACCTTCTTT--GTAGTAAGTAAGGGGAATGTATCGTCTGAGAGATTGA 8626 Query 7418 ATCT--ATTCTGTAA-ACCAAATACTGAAAGAGTACCTGTTCCAGTTCTATC 7466 |||| ||| || | | |||| | ||| |||||| ||||||||||| || Sbjct 8627 ATCTCAATTGTGGAGGAGCAAAGAGTGATTTAGTACCGGTTCCAGTTCTGTC 8678 Score = 113 bits (124), Expect = 5e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 6808 AATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGA 6867 ||||||||||||| || | ||||||||||| || | ||| ||||| |||| ||||| Sbjct 7957 AATTGTTCTTTTAATGCATCAATATGATCTAAGTACACATGGGCATCGCCTAATGTATGG 8016 Query 6868 ATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAA 6927 ||||||||||| | |||||||||| || || || | | ||||||||| ||||| Sbjct 8017 ATAAATTCACCACAATCCATATCAACAATATGTGCTATCATCTTTGTTAATAAGGCATAT 8076 Query 6928 GAAGCTACATTAAAAGGTACACCTAATCCCATATC 6962 ||||| | || || || |||||||| ||||| || Sbjct 8077 GAAGCGATGTTGAACGGGACACCTAACCCCATGTC 8111 >seq110 Length=108459 Score = 118 bits (130), Expect = 1e-21 Identities = 357/539 (66%), Gaps = 27/539 (5%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGA-GAATTTTCTCTTATTTTCAGACG 164456 || || ||| ||||||| | ||||| |||| ||| || || || | ||||| ||| | Sbjct 39437 AAGTTAGAACAAATGGGTATTGGTGGGTTAGA-CGACGAGTTCTCGCAGATTTTTAGAAG 39379 Query 164457 AGCATTTGCTTCTAGA-TCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACAT 164514 ||| ||||| |||| ||| ||| | | || | || |||| |||| | | |||| Sbjct 39378 AGCTTTTGCCAGTAGAATCATTTC--ACCAGATTTGGTAGAAAAGTTAGCGTTGAGACAT 39321 Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574 | || || | || || ||| ||||| ||| ||||||||||| || || || Sbjct 39320 GTCAAGGGGTTGTTGTTGTTTGGTCCTCCAGGTACAGGTAAAACATTGATTGCAAGACAA 39261 Query 164575 ATTGCTCAAGCTTTTAAA--TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632 |||| | || || || | || || ||| ||||||||||||| || | ||| Sbjct 39260 ATTGGTAAAATGTTGAATGTTAAGGAGCC--TAAGGTTGTTAATGGTCCAGAGATGTTGT 39203 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692 ||| ||||| |||| || |||| || ||||||||||||||| ||| || ||| | Sbjct 39202 CCAAGTATGTTGGTGCATCTGAAGAGAACATTAGAAAGTTGTTTCTGGATGCGGAAACTG 39143 Query 164693 AACAAAAGAAAGCAGGTTTAG-CTAGTAAATTACATGTTATTGTTTTTGATGAGATAGAT 164751 || | ||| || || | || | | || ||| | ||| | |||||||| | ||| Sbjct 39142 AATATAAGCAAAAGGGAGAAAACTCGCAG-TTGCATATCATTATCTTTGATGAATTGGAT 39084 Query 164752 GCTCTTTGCAAAAAACGTGG---TGATAA-TATTAT----------TCA-TGATGCAGTG 164796 | ||| ||| || | || || || | | || || |||| || Sbjct 39083 TCAGTTTTCAAGCAAAGAGGATCTGCAAAGTCTGATGGTACCGGGGTCGGTGATAATGTC 39024 Query 164797 GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTA 164856 || ||||||||| | | || || |||||||| || || || || ||||||||| | Sbjct 39023 GTAAATCAGTTGTTAGCGAAGATGGATGGTGTTGATCAATTGAACAACATTTTAATTATT 38964 Query 164857 GGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGA 164915 |||||||||||| || ||||| || ||| |||| |||||| |||| ||| |||| || Sbjct 38963 GGTATGACCAACAGATTAGATTTGATCGATAATGCGTTATTAAGACCCGGTAGATTCGA 38905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595868692910400