Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq144 152 6e-32
seq110 118 1e-21
>seq144
Length=22619
Score = 152 bits (168), Expect = 6e-32
Identities = 322/472 (68%), Gaps = 19/472 (4%)
Strand=Plus/Plus
Query 7009 TAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTC 7068
|| ||||| || || ||||||||||| ||||| | || ||| | ||| | ||||||
Sbjct 8212 TAGAATTGGCAGAAAACATGACATGGGGGTAAGGCCATCTTATCAAAATCTGGCGGATTC 8271
Query 7069 CAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATT 7128
|| || | ||| | ||| | |||||| | |||||||||||| || ||| | |||| |
Sbjct 8272 CATGCCGACATGATAATTCTTCTATCGTATGGATTTGTTTTCAACTTTTTAATAACATCT 8331
Query 7129 TGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCA 7188
||||||||||| | || || || || | || | ||| | | || | || |||
Sbjct 8332 TGTAATTGATCAACTCCTTGTCCAGAGTAGTCTGTGTCACAGTCCTTGTACTCTGCCCCA 8391
Query 7189 AAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAAT 7248
||||| ||||| ||||| || |||| ||||| |||||||| || ||| | || |||
Sbjct 8392 AAATGCCTCCACTGAAATCCGTAAACTGGACCCAAATCACCCTCGCGACGGTCTTTCAAT 8451
Query 7249 CCTAATCGATTTAAATTAGATT---TTGATCCATAAGCATCCCAAATATGTACAGAtttt 7305
|||| | || | || || || ||||||||| | |||||||| | ||| ||||
Sbjct 8452 CCTA-TGGAGTCTAAGTA--TTCCCTTGATCCATTGCCTTCCCAAATTTTAACACCTTTT 8508
Query 7306 tttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTC--TACTA 7363
| ||| || ||| || || ||| |||||| | ||||| || | || | || ||
Sbjct 8509 TCTGACAATTTTTTAGCATCCGTACATCCTTGTACAAACCACAACAACTCATGAATAATA 8568
Query 7364 TTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAATGTA----CTTAAATCAT-- 7417
| || ||||| |||||| ||||| | ||| ||||||||| || | | |
Sbjct 8569 GCTCTCGAAAAAACCTTCTTT--GTAGTAAGTAAGGGGAATGTATCGTCTGAGAGATTGA 8626
Query 7418 ATCT--ATTCTGTAA-ACCAAATACTGAAAGAGTACCTGTTCCAGTTCTATC 7466
|||| ||| || | | |||| | ||| |||||| ||||||||||| ||
Sbjct 8627 ATCTCAATTGTGGAGGAGCAAAGAGTGATTTAGTACCGGTTCCAGTTCTGTC 8678
Score = 113 bits (124), Expect = 5e-20
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 6808 AATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGA 6867
||||||||||||| || | ||||||||||| || | ||| ||||| |||| |||||
Sbjct 7957 AATTGTTCTTTTAATGCATCAATATGATCTAAGTACACATGGGCATCGCCTAATGTATGG 8016
Query 6868 ATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAA 6927
||||||||||| | |||||||||| || || || | | ||||||||| |||||
Sbjct 8017 ATAAATTCACCACAATCCATATCAACAATATGTGCTATCATCTTTGTTAATAAGGCATAT 8076
Query 6928 GAAGCTACATTAAAAGGTACACCTAATCCCATATC 6962
||||| | || || || |||||||| ||||| ||
Sbjct 8077 GAAGCGATGTTGAACGGGACACCTAACCCCATGTC 8111
>seq110
Length=108459
Score = 118 bits (130), Expect = 1e-21
Identities = 357/539 (66%), Gaps = 27/539 (5%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGA-GAATTTTCTCTTATTTTCAGACG 164456
|| || ||| ||||||| | ||||| |||| ||| || || || | ||||| ||| |
Sbjct 39437 AAGTTAGAACAAATGGGTATTGGTGGGTTAGA-CGACGAGTTCTCGCAGATTTTTAGAAG 39379
Query 164457 AGCATTTGCTTCTAGA-TCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACAT 164514
||| ||||| |||| ||| ||| | | || | || |||| |||| | | ||||
Sbjct 39378 AGCTTTTGCCAGTAGAATCATTTC--ACCAGATTTGGTAGAAAAGTTAGCGTTGAGACAT 39321
Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574
| || || | || || ||| ||||| ||| ||||||||||| || || ||
Sbjct 39320 GTCAAGGGGTTGTTGTTGTTTGGTCCTCCAGGTACAGGTAAAACATTGATTGCAAGACAA 39261
Query 164575 ATTGCTCAAGCTTTTAAA--TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632
|||| | || || || | || || ||| ||||||||||||| || | |||
Sbjct 39260 ATTGGTAAAATGTTGAATGTTAAGGAGCC--TAAGGTTGTTAATGGTCCAGAGATGTTGT 39203
Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692
||| ||||| |||| || |||| || ||||||||||||||| ||| || ||| |
Sbjct 39202 CCAAGTATGTTGGTGCATCTGAAGAGAACATTAGAAAGTTGTTTCTGGATGCGGAAACTG 39143
Query 164693 AACAAAAGAAAGCAGGTTTAG-CTAGTAAATTACATGTTATTGTTTTTGATGAGATAGAT 164751
|| | ||| || || | || | | || ||| | ||| | |||||||| | |||
Sbjct 39142 AATATAAGCAAAAGGGAGAAAACTCGCAG-TTGCATATCATTATCTTTGATGAATTGGAT 39084
Query 164752 GCTCTTTGCAAAAAACGTGG---TGATAA-TATTAT----------TCA-TGATGCAGTG 164796
| ||| ||| || | || || || | | || || |||| ||
Sbjct 39083 TCAGTTTTCAAGCAAAGAGGATCTGCAAAGTCTGATGGTACCGGGGTCGGTGATAATGTC 39024
Query 164797 GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTA 164856
|| ||||||||| | | || || |||||||| || || || || ||||||||| |
Sbjct 39023 GTAAATCAGTTGTTAGCGAAGATGGATGGTGTTGATCAATTGAACAACATTTTAATTATT 38964
Query 164857 GGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGA 164915
|||||||||||| || ||||| || ||| |||| |||||| |||| ||| |||| ||
Sbjct 38963 GGTATGACCAACAGATTAGATTTGATCGATAATGCGTTATTAAGACCCGGTAGATTCGA 38905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595868692910400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |