Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq11 129 5e-25
seq392 105 6e-18
seq315 104 2e-17
seq277 102 7e-17
>seq11
Length=459
Score = 129 bits (142), Expect = 5e-25
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| || ||||||||||||||||| ||||| | ||| |||||
Sbjct 3 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAG-- 60
Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
||| ||| | ||||| | || || ||| | || || |||||||| || |||||||
Sbjct 61 ATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAG 120
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||||||||| ||||| | ||| || | ||||||| | | | ||| |||| ||||
Sbjct 121 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGA 180
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | ||||| || || || || | ||| || ||||| || |||||
Sbjct 181 CTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229
Score = 116 bits (128), Expect = 3e-21
Identities = 172/242 (71%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || ||||| |||| ||| ||||| || ||||||||||| ||||| |
Sbjct 218 AAAAATTTGCATACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAAT 277
Query 94828 GTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885
||| ||||| ||| ||| | || || | || || ||| | || || ||||||
Sbjct 278 GTTGTAATCAG--ATAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTT 335
Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945
|| || ||||| ||||||||||| ||||| | ||| || | |||||| | | | |||
Sbjct 336 TGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTA 395
Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005
|||| ||||| || | ||||| || || || || | ||| || ||||| || |||
Sbjct 396 TCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGC 455
Query 95006 AT 95007
||
Sbjct 456 AT 457
>seq392
Length=124811
Score = 105 bits (116), Expect = 6e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| || || |||||||| || ||||||||||| | ||| |||||
Sbjct 104801 CCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAG-- 104858
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
||| ||| | ||| || | || || || | |||||||||||||| || || || |
Sbjct 104859 ATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTG 104918
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||||||||| ||||| | || || | ||||||| | | | |||||| | || |
Sbjct 104919 GAATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAA 104978
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | || ||||| || ||||| | ||| || || || || |||||
Sbjct 104979 CTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 105027
>seq315
Length=97186
Score = 104 bits (114), Expect = 2e-17
Identities = 158/223 (71%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA-- 94852
||| || ||||||||||||||||| ||||| | ||| ||||| ||| ||| |
Sbjct 2 CAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAG--ATAAGGTTCTACCG 59
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| | || || ||| | || || |||||||| || ||||| ||||||||||| |||
Sbjct 60 TCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTG 119
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || | |||||| | | | ||| || | ||||| || | || |||
Sbjct 120 TCTTGAATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATG 179
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTACAA 95015
|| || || || | ||||| || ||||| ||||| ||| ||
Sbjct 180 GTCTTACCTGTCAATGTTTTAACGAAGATTTGCATATTTATAA 222
>seq277
Length=184381
Score = 102 bits (112), Expect = 7e-17
Identities = 116/154 (75%), Gaps = 4/154 (3%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| || ||||||||||||||||| ||||| | ||| |||||
Sbjct 153 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAG-- 96
Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
||| ||| | ||||| | || || ||| | || || |||||||| || ||||| |
Sbjct 95 ATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTG 36
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932
|||||||||| ||||| | ||| || | ||||||
Sbjct 35 GAATACCTTCCTTGTCTTGAATCTTGGACTTGAC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448288711983840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |