Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq381 129 9e-26 seq89 105 1e-18 >seq381 Length=365744 Score = 129 bits (142), Expect = 9e-26 Identities = 191/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||||| | |||||||||||||||| ||||||||||||||||| Sbjct 275393 GCTAAGCGTCACAGAAAGATCT-TGAGAGATAACATCCAAGGTATCACCAAGCCAGCTAT 275451 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | || | | ||||| || |||||| | || || ||| | || ||||| | Sbjct 275452 CAGAAGATTAGCCAGAAGAGGTGGTGTTAAGCGTATTTCCGGTTTGATTTACGAAGAAGT 275511 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | | ||| || |||| |||| | | | ||||||| || ||| || ||||||||| Sbjct 275512 TAGAGGTGTCTTAAAGACCTTCTTAGAAAACGTTATCAGAGACGCTGTCACCTATACCGA 275571 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| || || || | ||| | || || || ||||| | ||||| Sbjct 275572 ACACGCCAAGAGAAAGACCGTTACTTCATTAGATGTTGTTTACGCCTTGAAGAGACAAGG 275631 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 275632 TAGAACCTTATATGGTTTCGGTGGTTAA 275659 >seq89 Length=100942 Score = 105 bits (116), Expect = 1e-18 Identities = 169/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||||| | |||||||||| ||||| || |||||||||||||| Sbjct 64413 GCTAAGCGTCACAGAAAGATCT-TAAGAGATAACATTCAAGGTATTACCAAGCCAGCTAT 64471 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| || |||||| | |||||||| | || ||||| | Sbjct 64472 CAGAAGATTGGCCAGAAGAGGTGGTGTTAAGCGTATTTCTGGATTAATTTACGAAGAAGT 64531 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||||| |||| ||| | | | || ||| ||||| || || || || Sbjct 64532 GAGAGGAGTTTTAAAGACATTCTTGGAAAATGTCATCAGAGATGCAGTCACATACACAGA 64591 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 64592 ACACGCCAAGAGAAAGACTGTTACTTCATTGGATGTTGTTTATGCTTTGAAGAGACAAGG 64651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074794047692