Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq212 253 2e-62 >seq212 Length=365203 Score = 253 bits (280), Expect = 2e-62 Identities = 585/877 (67%), Gaps = 15/877 (2%) Strand=Plus/Plus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 ||||| || ||||||||||| |||||||| || || |||||||| | || || || | Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058 Query 21245 TCCATAAAATCAAATGGATTTTCA--GATTTAAATATTTTATTACAACCCAGTTCTGATA 21302 |||||||| || ||||| || | | | |||| |||| | ||| | | || Sbjct 283059 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACCTTTTTGTT--ACCTAAGGCAACTA 283116 Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362 |||||||||| || || ||||| | |||||||||||||| | ||| |||||||| | | Sbjct 283117 ATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATA 283176 Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422 || | || | ||| | ||||| |||||| |||| || |||||| || | Sbjct 283177 ATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATAA 283236 Query 21423 TATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAA 21482 | || | || || | || | ||| || || | || ||||| | Sbjct 283237 TTCTTTCAACAATAACTGAATCTGGTCTGTTTTGTAAGTGAGAGAATAATAAGCATGCGA 283296 Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542 ||||| ||| ||||||||||| | || |||||||| || || || |||||||| |||| Sbjct 283297 AATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCAGGCA 283356 Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602 |||| |||||||| |||||||| || || || ||||||| || |||||||| || | Sbjct 283357 TTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATACCTT 283416 Query 21603 CAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATT 21662 |||| || || || |||||||||| ||| ||| || | || | ||| |||||| Sbjct 283417 CAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGATCCATC 283476 Query 21663 TTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGA 21721 || ||||| | ||||| | || ||||| || | || ||||| || || |||| Sbjct 283477 TTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAATAAGA 283536 Query 21722 TGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTA-TACATTTCAGA 21780 | | | ||| | | ||| | ||| || | || ||||||| Sbjct 283537 AG-TCTGCTTCCTTTGGATCTTTGATG-TAAGTGTCAATAAGTAACGAGTAGGTTTCAGA 283594 Query 21781 ATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC 21840 || || ||||| ||| || || || ||||| |||||| | || |||| | |||||| Sbjct 283595 GTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTGAAC 283654 Query 21841 CTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAA 21900 || | | | || || | |||||||||| || || || || ||| || ||||| || Sbjct 283655 TTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAGAA 283714 Query 21901 TGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTT---TTCCAATCTAA 21957 |||||| || | || || |||| |||||| | |||||||| ||||| || | Sbjct 283715 TGCCAAGATTCTAGAGATGAAGTATCTTTCGTTGTTGTTTAATTTTTCATTCCAGTC--A 283772 Query 21958 TAA--ATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTA 22015 | | ||| || |||||| | |||||| | ||||| ||| ||| |||||| || Sbjct 283773 TGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTG 283832 Query 22016 TACATAATCCAGATATCATTATATATTATTGGAAATA 22052 ||||| |||||| || | ||| | ||||| |||| Sbjct 283833 TACATTTGCCAGATTTCGTGGTATTTGATTGGGAATA 283869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531897847950560