Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq212 423 2e-113 seq387 104 3e-17 >seq212 Length=365203 Score = 423 bits (468), Expect = 2e-113 Identities = 1464/2277 (64%), Gaps = 39/2277 (2%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 || || ||||| | ||| | || | || || | || || ||||| || || |||| | Sbjct 167012 GTAAACTGAATAGCAGCAGCAGCAGCTTGAGTTCTTAAGTAATACATACCTGTCTTTAAA 167071 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || |||| || || |||||||| |||| || | | || ||| || Sbjct 167072 CCCTTCTTCCAACCATAGAAATGCATTGAAGTTAACTTACCCATAGTTGGGTCTTTGATG 167131 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || ||||| | |||||| |||||| ||||| || | |||||||||||||| | || Sbjct 167132 TGAATATTTAAAGATTGTGATTGATCAATGAATGCAGCTCTGTCTGCAGCCATGTCAATA 167191 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAG 62233 || |||||| | ||||||||||| || || || || | ||||| || ||||||| Sbjct 167192 ATATGCTTTTGGGAAATTTCCCAAACGGTCTTGTATAAGGCCTTTAAT-TCATCTGGAAT 167250 Query 62234 GTTTGT-----ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62288 ||| | ||| |||| ||||| || | ||||| | ||||| || |||||| Sbjct 167251 GTTAGGCAAGGATT--GAATAGATCCGTTATTAGAGATAATATTGTTCTTCATATCATCA 167308 Query 62289 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 62348 ||||| | | || |||| | | | | | || || || | ||| ||||| Sbjct 167309 TTCCAGATACCTAAATCAACTAAATCACGCAATAAGTATGGGTTGACAATTTGGAATTCA 167368 Query 62349 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTT 62408 |||| ||| ||||| | | ||||||||| ||||| || || | | ||||| | Sbjct 167369 CCAGCCAAAACTCTTCTGGAGTAAATATTTGAAGTATATGGCTCGAAGCATTCATTGTAA 167428 Query 62409 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 62468 ||||| ||||||| |||||| ||||| ||||| || || || || ||| |||||||||| Sbjct 167429 CCCAAGATTTGAGAAGTTGAGGCAGTTGGCATTGGAGCAACTAACAAAGAATTTCTAAGA 167488 Query 62469 CCGTATGTT---CTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACA 62525 || ||| | || | ||| | ||| | || ||||| | ||| | || | ||| Sbjct 167489 CC--ATGCTTAGCTAACTTT-TGTTTCAAAGTATCCCAGTCCCATAATTCAGTTGGTTTT 167545 Query 62526 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCG 62585 ||||| ||||| ||| || ||||| |||| || | | Sbjct 167546 CTATCCCATAAATCAAATTGTAAGATACCCTTAGAAGCTGGAGATCCCTCATAGGTTTGG 167605 Query 62586 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 62645 ||||||||||| ||||||| ||| || || | ||||||| |||||| || Sbjct 167606 TATGGTCCTTCAACTTCAGCTAACTCAATGGATGCTTCGACAGCACCGTGATAAATAGTC 167665 Query 62646 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT-TTAAGAG 62704 ||||| || | |||||| || | ||||| || |||||||| |||| |||| Sbjct 167666 TCGAAAATTTGAGTATTTAATTCCTTAGCTTCTTGGGAGTCAAATGG-TAATCTTAATGC 167724 Query 62705 AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62764 |||||||| || ||||| ||||| ||||| | | || ||||| | |||| |||| || Sbjct 167725 CATAAACGCATCTGCTAAACCTTGGACACCTAAGGCAATTGGTCTGTTTCTCATATTGGA 167784 Query 62765 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 62824 | || |||||||||| || || | ||| || |||||| | || | || | | Sbjct 167785 GTTTCTTGCTTCTGGAACTGGGTAGAAGTTACGGTCAATAATTCTGTTCAAGTTACGGGT 167844 Query 62825 AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-------------GCCCAT 62871 | || || || || | | || |||||| | | | || | Sbjct 167845 CACAACCTTAGTAACTTCATGTAACTTTTCAAAATCGTACCAACTTGAGGTACTGTCCTT 167904 Query 62872 CTATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 62931 || ||||| | ||| || | || || | |||||||| || || |||| | | Sbjct 167905 CTCA-ACAAAAGAGGGCAAAGCGATGGAAGCTAAGTTACAAACAGCAACTTCATCGGGAG 167963 Query 62932 CCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTT 62991 | | |||| | || ||| || | || |||| ||| | |||||||| | || Sbjct 167964 CAGAGTATTCAACAATTTCACAACATAAGTTGGATGACTTAATAATACCTAAATTCTTTT 168023 Query 62992 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCT 63051 | || | ||||||||||| ||||| || || | |||||||| |||||||||||| | | Sbjct 168024 GGTTTGTTTTTTTGTTACAAGCATCTTTGTATAACATGAATGGTGTACCAGTTTCAGTTT 168083 Query 63052 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTT 63111 ||| |||| ||| || | ||| | | ||||| | | ||| | | ||| Sbjct 168084 GAGCATCTAAAATGGCGTACCATAATTTCTGCGCCTTAACAACCGATCTACCACGATTTT 168143 Query 63112 CTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAG 63171 || |||| ||| | |||||| |||||| || || || | |||| || |||| Sbjct 168144 CTTTTTCATATTTGGAGTACAATTCTTCGAATTCATCACCGTAGACATCTGATAAACCAG 168203 Query 63172 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63231 || ||||| ||| | | ||| | ||| ||||| | | | |||| ||||| || | Sbjct 168204 GAGCTTCATTTGGAGAGAACAAAGTCCAGTCTCCATTTTGTTCGACTCTCTTCATGAATA 168263 Query 63232 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63291 |||||||||||| | || |||| ||||| | ||| ||| || || || || Sbjct 168264 AATCAGGAATCCATAAGGCAGGGAATAAGTCTCTAGCTCTGATTTCTTCCTTACCATGAT 168323 Query 63292 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63351 ||||| | | ||| | ||| | | ||||| | |||||| || || ||||| | ||| | Sbjct 168324 TCTTTCTTATATCTATGAAATCAAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAA 168383 Query 63352 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63411 | || || | ||||| || || ||||| | || | ||| ||||| ||| |||| | Sbjct 168384 AGGCGCCTGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACAC 168443 Query 63412 TCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGG 63471 | ||| ||||| ||||| || || ||||||| ||||| | || || ||| | | Sbjct 168444 GTACCATAGGAATGATACCATTAGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTAG 168503 Query 63472 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 63531 |||||| || || || ||| || || || || | || || || || || ||| Sbjct 168504 AACGAATGTTGTGGATATGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATG 168563 Query 63532 GTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGC 63591 || || || || |||||||| || || || || |||| || | ||||| Sbjct 168564 TCTTCAAGGTATCGTAGATACCATCGATAGAGTCTTCTTTCATAGCAACCAAGAAACAAG 168623 Query 63592 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63651 |||||| || | | | ||| || || || ||||| || || ||| |||| || || Sbjct 168624 AAGACATCTGAGGGCTAGGAGTACCAGCGTTGAATAAAGTTGGGGAACCGTGAGTGAAAA 168683 Query 63652 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTC 63711 || ||| || | | ||||||| || ||| || || || || ||| |||| Sbjct 168684 ATCTTTGGGACATCATGTTGTACGATTCGATAACTCTTTCGATGTCATCACCATGGATTC 168743 Query 63712 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 63771 | |||||||| | ||| | || ||||| |||||||| | | ||| || ||| ||| Sbjct 168744 CGACTGCGACTCTCATAATCAAATGCTGTGGTCTTTCGGCAACCTTACCATTAATTCTCA 168803 Query 63772 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 63829 | ||||| ||| ||||||| || || || |||||||||||||| ||||| || || || Sbjct 168804 ATAAGTAAGATCTTTCCAAGGTCTTGAATCCAAAATAGTTGTAGTTGAAA--TCACGATC 168861 Query 63830 GTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG--TTAACTATATCCATGGTGATA 63887 | | |||| | ||||| | | || || ||| | | || ||||| ||| Sbjct 168862 AAACACAATAGCAGAGTTCAACTCAT--TTGAATTGGCTTGAATAATATCGTATGTGTCT 168919 Query 63888 CTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCC 63947 | ||||| || || || ||| ||| | || || |||||||| | | || |||| Sbjct 168920 TTGGAAATCATAGGTGAGTGTAAACCAGTCTTTGGGTTAACATATTCATACAACTCCTTA 168979 Query 63948 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCG 64007 | |||| | ||| | || | |||| |||||||| || || ||||| ||||| || Sbjct 168980 CTGACTTGAGAGAATTGCTTGGTAGTTTGCTTGTGTAAGTTGGAAACGGCGATTCTTGCT 169039 Query 64008 GCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGA 64067 || | ||| || || || || || |||||| | || || |||| || |||| Sbjct 169040 GCCAAAATAGCGTAGTCAGGGTGGATTGTAGTCATATAAGCAGCAGTTTCAGCAGCCAAG 169099 Query 64068 GTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATT 64127 | || ||||| | || | || || | || | || ||||||| || | || Sbjct 169100 TTATCTAATTCAATAGTGTTGACCCCTTGGTAAACACCAGAAATAACCCTCTGTGTGATA 169159 Query 64128 TTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTG 64187 || || || | || | |||| ||| |||||||||||| || || | || ||| Sbjct 169160 GCAACTGGTTCGACGTGTGCAGTGTCTAACCCATAACATAATCTTTGAACTCTAGCAGTG 169219 Query 64188 ATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAACATTTTT 64244 || || ||||| |||| ||||| ||||| || |||| ||| ||||| || Sbjct 169220 ATCTTGTCAAAGCGGACAGGCTCCTTACGTCCATCTCTTTTATAAACATACATTATT 169276 Score = 253 bits (280), Expect = 3e-62 Identities = 592/884 (67%), Gaps = 18/884 (2%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| |||| || | |||||||| || || || ||||| | || || || ||| Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| || || || || |||||||| || |||| ||||| || || || | Sbjct 283059 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACCTTTTTGTTACCTAAGGCAACTAAT 283118 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 |||||||| || |||||||| | ||| ||| | | ||| ||||| |||| | | Sbjct 283119 AATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAAT 283178 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 | ||| | ||| || | |||||||| ||| || | || || || || ||||| Sbjct 283179 GAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATAATT 283238 Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312 | ||| | || | ||| | ||| || || | || ||||||||| Sbjct 283239 CTTTCAACAATAACTGAATCTGGTCTGTTTTGTAAGTGAGAGAATAATAAGCATGCGAAA 283298 Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372 || || | ||| || || | || |||| ||||||||| || || | || |||||| Sbjct 283299 TCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCAGGCATT 283358 Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432 | || | ||| || | ||| || || ||||| ||||| ||| ||||| || ||||| Sbjct 283359 AAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATACCTTCA 283418 Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCGCTGTCATGTATCCACTTT 33489 || || || ||||||| | ||| || || ||||| | | ||| ||||| || Sbjct 283419 ACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGATCCATCTT 283478 Query 33490 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33549 ||||||||| |||||||| || | ||| || || | || || ||||| || | || Sbjct 283479 AAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAATAAGAAG 283538 Query 33550 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA-TACATTTCCGAATG 33608 | | ||| || |||||| | ||||| || || | | || | || |||| || || Sbjct 283539 TCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAATAAGTA-ACGAGTAGGTTTCAGAGTG 283597 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 |||||||| || || || || |||||||||||| | || || | ||| || ||||| Sbjct 283598 GATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTGAACTTC 283657 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728 | | | || ||| |||| ||||| || || || |||||| || ||||| || || Sbjct 283658 AGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAGAATGC 283717 Query 33729 CAATACATGTTTT----ATAAAATATTTTTCGTCTGGTG-TTAGTTT---ATTCCAATCA 33780 ||| | || | || || ||| |||||| || || ||| ||| |||||| ||| Sbjct 283718 CAAGA----TTCTAGAGATGAAGTATCTTTCGT-TGTTGTTTAATTTTTCATTCCAGTCA 283772 Query 33781 TTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33840 | |||| ||| || ||| | |||||| | ||||| || || || || ||||| || Sbjct 283773 TGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTG 283832 Query 33841 TACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 ||||| | |||||| || | |||| ||||||||| | ||| || Sbjct 283833 TACATTTGCCAGATTTCGTGGTATTTGATTGGGAATAAAACGAA 283876 >seq387 Length=274674 Score = 104 bits (114), Expect = 3e-17 Identities = 328/507 (65%), Gaps = 11/507 (2%) Strand=Plus/Plus Query 61994 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 62053 |||||||||||| | | || | || || | |||||| ||||| || ||||| | Sbjct 209980 TGTGAATTGAATAGCCCTAGTCGCAGCTTGTGTCCTTAGATAATACATACCAGTTTTCAA 210039 Query 62054 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTAT 62113 || ||| | || ||||| | || |||| ||| | | | ||||| || Sbjct 210040 GCCTTTTTCCCAGGCATAGAAATGACTGCTTGTTAATTTACCAAAGGTTGGATCCTGTAA 210099 Query 62114 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62173 || ||||||||| ||| || || ||||| ||| || || || || | | || Sbjct 210100 ATAAATATTCATACTTTGCAGCTGGTCAATGAATTTTCCTCTATCAGCTGCTAGATCAAT 210159 Query 62174 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG--- 62230 ||| ||||| | ||||||||||| |||||||||| | |||| | || | ||| Sbjct 210160 AATCACTTTTTGAGAAATTTCCCAAACTGTTTTATAAAGTTGCTTCAATTCATTTGGTAT 210219 Query 62231 AAGGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62290 || | | | || ||||| ||||| | ||| || || |||| | || | ||| Sbjct 210220 AACGGGTATGTTTTGAATCGATCCGCTTTCTAAGATTATTTTATTTCTCATAGAAGAATT 210279 Query 62291 CCATAATTTTCTCTCGGTTAAAACTCT----AAGGAGATGCGGATTAACTACTTGAAATT 62346 ||| | | || ||||| | | ||| | || || ||||||||||||| Sbjct 210280 CCAGATACCTAGGTCAATTAAATCCTTCATCAAGTATTTG----TTCACTACTTGAAATT 210335 Query 62347 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62406 ||||||| ||||| || || | || |||||| || || ||||| | | |||||| Sbjct 210336 CTCCAGATAATACCCTTCGGTTATATATATTAGATGTGTAAGGTTCAAAACATTCATTAA 210395 Query 62407 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62466 || ||||| |||| ||||| ||||| ||||| ||||| || | ||| ||| |||| Sbjct 210396 ACCCTAAAATCTGAGATGTTGAAGCAGTAGGCATTGGTGCAACTAGTAACGAATTCCTAA 210455 Query 62467 GACCGTATGTTCTGATTTTATCTTTTA 62493 ||| |||| | |||| ||||| Sbjct 210456 CACCTATTGTTTTAGCTTTAGATTTTA 210482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943742643040