Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq212 154 4e-32 seq144 105 2e-17 >seq212 Length=365203 Score = 154 bits (170), Expect = 4e-32 Identities = 488/748 (65%), Gaps = 30/748 (4%) Strand=Plus/Minus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278 |||||||||||| | | |||||||| || || || | || || || | || Sbjct 283717 GCATTCTTTGCTGCTTCTGACGGTATTGTCAACGAAAACTTGGTTGAAAACTTCTCTGCT 283658 Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| ||||| ||||| |||| ||||||||| ||| | ||||| ||||| ||||| | Sbjct 283657 GAAGTTCAAATTCCAGAAGCCAAATGTTTCTACGGTTTCCAAATTATGATGGAAAACATC 283598 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACT--CGTAGAAGATAAAGACGAACAAC 22396 ||| | ||||| || || | | || | |||| | | ||||| | | ||| | Sbjct 283597 CACTCTGAAACCTACTCGTTACT--TATTGACACTTACATCAAAGATCCAAAGGAAGCAG 283540 Query 22397 GAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGC 22456 ||||||| || || || ||| | || || ||||| ||||| |||||||| Sbjct 283539 ACTTCTTATTCAATGCTATCGACAACATCCCATGTATCAAGAAGAAGGCTGATTGGGCTT 283480 Query 22457 TGAAATGGATGAACAATGAA----CGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTG 22512 | | |||||| | |||| |||| ||||| ||| | | |||| || || | Sbjct 283479 TAAGATGGATCAGTGATGATGATGCGTT-ATTCGGCGAAAGATTAGTTGCCTTCGCAGCT 283421 Query 22513 GTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCA 22572 |||||||| |||||||| ||| ||||| | | || || ||| |||| || | | Sbjct 283420 GTTGAAGGTATTTTCTTCAGTGGTTCATTTGCTTCTATTTTCTGGTTAAAGAAGAGAGGT 283361 Query 22573 ATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACC 22632 | ||||| ||| |||| || || || || ||||| | || ||||| ||| | ||||| Sbjct 283360 TTAATGCCTGGTTTAACCTTCTCCAACGAATTAATCTGTCGTGATGAAGGTTTACATACT 283301 Query 22633 GATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTT--CCATATGAAACTG 22690 ||||| || ||||| ||| || | ||| | | ||| ||| || | | Sbjct 283300 GATTTCGC----ATGCT-TATT---ATTCTCTCACTTACAAAACAGACCAGATTCAGTTA 283249 Query 22691 TACTTGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGT 22747 | |||| | |||| || | |||||| | ||| |||| | || || | Sbjct 283248 TTGTTGAAAGAATTATCACTGAAGCAGTTACTATCGAAAAAGAATTTTTCGTTGATGCTT 283189 Query 22748 TACCAGTAAGTCTCATT----GGTATCAATGCCGAATCAATGAGTACATATATTAAATTT 22803 ||||| | |||||| ||||| || | | |||| || ||| || |||| Sbjct 283188 TACCAAT----CTCATTATTAGGTATGAACTGTAACTTAATGTGTCAATACGTTGAATTC 283133 Query 22804 GTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCA 22863 ||||| ||| | ||||| || | | ||| | |||| ||| ||||| || ||| Sbjct 283132 GTTGCTGATAGATTATTAGTTGCCTTAGGTAACAAAAAGGTTTACAACGTTACCAACCCA 283073 Query 22864 TTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTT 22923 || || | |||||| ||||| | | ||||||||||| ||||||||||| |||||| Sbjct 283072 TTCGACTTTATGGAAAACATTTCTTTAGCCGGAAAGACCAACTTCTTCGAAAAGAGAGTT 283013 Query 22924 GGTGAATACCAAAAAGCAGGTGTTATGG 22951 |||| |||||||| || ||||| |||| Sbjct 283012 AGTGACTACCAAAAGGCCGGTGTCATGG 282985 Score = 136 bits (150), Expect = 1e-26 Identities = 494/764 (65%), Gaps = 12/764 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||| | ||||| | | ||| ||||| |||| || || |||||||||||| Sbjct 168681 TTCACTCACGGTTCCCCAACTTTATTCAACGCTGGTACTCCTAGCCCTCAGATGTCTTCT 168622 Query 363607 TGCTTTCTT-CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | ||||| || || || ||||| ||||||| || || | |||| Sbjct 168621 TG-TTTCTTGGTTGCTATGAAAGAAGACTCTATCGATGGTATCTACGATACCTTGAAGAC 168563 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 ||||| | |||||||||| ||| || || |||||| || |||||||| ||||| | Sbjct 168562 ATGTGCCTTGATTTCCAAGAGTGCTGGTGGTATTGGTTTACATATCCACAACATTCGTTC 168503 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTT 363783 || | ||||||| || || || ||| || ||||| | |||| ||| | Sbjct 168502 TACTG-GTGCTTACATTGCTGGTACTAATGG-TACTTCTAATGGTATCATTCCTATGGTA 168445 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| ||| |||| ||||| | || ||||| || ||||| ||| | ||| || Sbjct 168444 CGTGTTTTTAACAACACTGCTCGTTATGTCGATCAAGGTGGTAACAAGAGACCAGGCGCC 168385 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| | || | ||||| ||||| ||||| ||||| || | || | | || Sbjct 168384 TTTGCCCTTTACTTAGAGCCATGGCATGCGGATATCTTTGATTTCATAGATATAAGAAAG 168325 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 || || || || ||| | | || | || | ||| ||| | ||| || |||| Sbjct 168324 AATCATGGTAAGGAAGAAATCAGAGCTAGAGACTTATTCCCTGCCTTATGGATTCCTGAT 168265 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGT 364023 || |||||| | || || | | | ||| | | || | ||| | ||| | Sbjct 168264 TTATTCATGAAGAGAGTCGAACAAAATGGAGACTGGACTTTGTTCTCTCCAAATGAAGCT 168205 Query 364024 CCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCG 364083 || ||| | || ||||| | ||||| || | | | | ||| || |||||| Sbjct 168204 CCTGGTTTATCAGATGTCTACGGTGATGAATTCGAAGAATTGTACTCCAAATATGAA--- 168148 Query 364084 GAGGGAAAGGCTCGTA---AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 | | ||| | ||| | || || ||||| |||||| ||||| | ||| Sbjct 168147 AAAGAAAATCGTGGTAGATCGGTTGTTAAGGCGCAGAAATTATGGTACGCCATTTTAGAT 168088 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 | || | ||| || || ||||| | ||||| ||||||||| | || ||| || | Sbjct 168087 GCTCAAACTGAAACTGGTACACCATTCATGTTATACAAAGATGCTTGTAACAAAAAAACA 168028 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATAC 364260 ||||| || | | |||| ||| || |||| ||||| || ||| |||||||| Sbjct 168027 AACCAAAAGAATTTAGGTATTATTAAGTCATCCAACTTATGTTGTGAAATTGTTGAATAC 167968 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 | |||||||| || ||| || |||||| | || || ||||| Sbjct 167967 TCTGCTCCCGATGAAGTTGCTGTTTGTAACTTAGCTTCCATCGC 167924 >seq144 Length=22619 Score = 105 bits (116), Expect = 2e-17 Identities = 236/347 (68%), Gaps = 8/347 (2%) Strand=Plus/Minus Query 111370 TGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTT 111429 |||||||| | | ||| |||| |||| || || | ||| |||| ||| ||||||| Sbjct 8551 TGTGGTTTGTACAAGGATGTACGGATGCTAAAAAATTGTCAGAAAAAGGTGTTAAAATTT 8492 Query 111430 GGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAG 111489 |||| || ||||||||| | || | |||| || | || | ||| || | Sbjct 8491 GGGAAGGCAATGGATCAAGGGAATACTTAGACTCCATAGGATTGAAAGACCGTCGCGAGG 8432 Query 111490 GTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAA-AACC 111548 ||||| | || ||||||||||||||||| ||| | || ||||| ||||| ||||| || Sbjct 8431 GTGATTTGGGTCCAGTTTACGGATTTCAGTGGAGGCATTTTGGGGCAGAGTACAAGGACT 8372 Query 111549 ATG-CAC-GACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAA 111606 || ||| |||| | || ||| ||| |||||||||||| |||| ||| | || Sbjct 8371 GTGACACAGACTACTCTG---GACAAGGAGTTGATCAATTACAAGATGTTATT-AAAAAG 8316 Query 111607 TTAAGAAC-AACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665 || | ||| || ||| | | | ||||| ||| |||||||| || | || Sbjct 8315 TTGAAAACAAATCCATACGATAGAAGAATTATCATGTCGGCATGGAATCCGCCAGATTTT 8256 Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 || || ||||| | || ||||||||| || | ||||| || || || Sbjct 8255 GATAAGATGGCCTTACCCCCATGTCATGTTTTCTGCCAATTCTACGT 8209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346185547208