Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq11 107 2e-18
seq392 89.7 4e-13
seq315 87.8 2e-12
>seq11
Length=459
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||||||||| || | || || || || || ||| | ||| || ||
Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| ||| ||| |||| || || || ||| || || ||||| | || || ||
Sbjct 397 GATACTATTG-ACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 339
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||||| | |||| || || || ||||||||||| | | |||| | | ||||| ||
Sbjct 338 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAA 279
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||||||| |||||| ||||| |||| |||||||| |||| ||
Sbjct 278 CATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 231
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||||||||| || | || || || || || ||| | ||| || ||
Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| ||| ||| |||| || || || ||| || || ||||| | || || ||
Sbjct 169 GATACTATTG-ACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCA 111
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||||| | |||| || || || |||||||| || | | |||| | | ||||| ||
Sbjct 110 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAA 51
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||||||| |||||| | || | || |||||||| |||| ||
Sbjct 50 CATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGG 3
>seq392
Length=124811
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||||||||| ||||| || | || || || ||||||||| | ||| || ||
Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|||||| ||| |||| || || || || || || ||||| | || |||
Sbjct 104970 TCAGACACTATTG-ACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGA 104912
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | || | || || || ||||||||||||| | |||| | | |||||
Sbjct 104911 CCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTA 104852
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| || || || | || | || || ||||| |||| ||
Sbjct 104851 CAACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 104801
>seq315
Length=97186
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 115281 TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340
|||| |||||||| || || ||||| | || || || ||||||||| | ||| || |
Sbjct 219 TAAATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAAT 160
Query 115341 CCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399
| ||| ||| ||| |||| || || || ||| || || ||||| | ||
Sbjct 159 CTTCCGATACTATTG-ACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCA 101
Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459
|| || |||||| | |||| || || || |||||||| || | | |||| | | |||
Sbjct 100 GACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGAT 41
Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGA 115499
|| |||||||||||||| |||||| | || | || ||||
Sbjct 40 TACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425341698357280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |