Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq11 107 2e-18 seq392 89.7 4e-13 seq315 87.8 2e-12 >seq11 Length=459 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || | || || || || || ||| | ||| || || Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| ||| |||| || || || ||| || || ||||| | || || || Sbjct 397 GATACTATTG-ACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 339 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| || || || ||||||||||| | | |||| | | ||||| || Sbjct 338 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAA 279 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||||||| |||||| ||||| |||| |||||||| |||| || Sbjct 278 CATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 231 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || | || || || || || ||| | ||| || || Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| ||| |||| || || || ||| || || ||||| | || || || Sbjct 169 GATACTATTG-ACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCA 111 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| || || || |||||||| || | | |||| | | ||||| || Sbjct 110 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAA 51 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||||||| |||||| | || | || |||||||| |||| || Sbjct 50 CATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGG 3 >seq392 Length=124811 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||||||||| ||||| || | || || || ||||||||| | ||| || || Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| ||| |||| || || || || || || ||||| | || ||| Sbjct 104970 TCAGACACTATTG-ACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGA 104912 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | || || || ||||||||||||| | |||| | | ||||| Sbjct 104911 CCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTA 104852 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| || || || | || | || || ||||| |||| || Sbjct 104851 CAACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 104801 >seq315 Length=97186 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 115281 TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340 |||| |||||||| || || ||||| | || || || ||||||||| | ||| || | Sbjct 219 TAAATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAAT 160 Query 115341 CCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 | ||| ||| ||| |||| || || || ||| || || ||||| | || Sbjct 159 CTTCCGATACTATTG-ACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCA 101 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 || || |||||| | |||| || || || |||||||| || | | |||| | | ||| Sbjct 100 GACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGAT 41 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGA 115499 || |||||||||||||| |||||| | || | || |||| Sbjct 40 TACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425341698357280