Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq336 140 2e-28
seq11 120 2e-22
seq315 109 4e-19
seq442 104 2e-17
seq260 104 2e-17
seq392 102 5e-17
seq422 98.7 7e-16
seq248 84.2 1e-11
>seq336
Length=2221
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 914 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 855
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 854 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 820
>seq11
Length=459
Score = 120 bits (132), Expect = 2e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| || | ||| |||||||| | ||| || |||||||| ||||||||||
Sbjct 229 TACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAG 288
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || | |||| |||||||| || ||||| || || | | |||||| || | |
Sbjct 289 ATAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTG 348
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| ||||| ||| || ||| ||||| | | |||||| | ||| |
Sbjct 349 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGA 408
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| || ||||| ||||| ||||| || || || || || |||||
Sbjct 409 CTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| || | ||| || || || | ||| || |||||||| ||||||||||
Sbjct 1 TACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAG 60
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || | |||| |||||||| || ||||| || || | | |||||| || | |
Sbjct 61 ATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAG 120
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| ||||| ||| || ||| || || | | |||||| | ||| |
Sbjct 121 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGA 180
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| || ||||| ||||| ||||| || || || || || |||||
Sbjct 181 CTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229
>seq315
Length=97186
Score = 109 bits (120), Expect = 4e-19
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
|| |||||||| ||||||||||| || | |||| |||||||| || ||||| ||
Sbjct 24 TCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAA 83
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| | | |||||| || | || | ||||| ||||| ||| || ||| |||||
Sbjct 84 ATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTG 143
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| | |||||| | ||| |||||||| ||||| || ||||| ||||| ||||| |||
Sbjct 144 TCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCTGTCAATGTTTTAACG 203
Query 38307 AATATCTGCATGTTT 38321
|| || ||||| |||
Sbjct 204 AAGATTTGCATATTT 218
>seq442
Length=263
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 127 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 186
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 187 GCCAATATTTAGCTTTA 203
>seq260
Length=309
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 137 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 78
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 77 GCCAATATTTAGCTTTA 61
>seq392
Length=124811
Score = 102 bits (112), Expect = 5e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
||||||||| || | || || || || | ||| ||||||||||| |||||||||||
Sbjct 104800 ACCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGA 104859
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| | | || |||||||| || || || || |||| | |||||| || | ||
Sbjct 104860 TAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGG 104919
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| ||||| || || ||| || || | | ||| ||| | ||||||
Sbjct 104920 AATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAAC 104979
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|||||| ||||| || ||||| || || || || ||||| || ||||| ||
Sbjct 104980 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105030
>seq422
Length=309
Score = 98.7 bits (108), Expect = 7e-16
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| ||||| |||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 167 CTCTCTTTTCAACGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 108
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 107 GCCAATATTTAGCTTTA 91
>seq248
Length=393
Score = 84.2 bits (92), Expect = 1e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 19960 GTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGC 20019
|||||||||| |||||| |||| |||||||||||||||||||||| || ||||||||||
Sbjct 393 GTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTCGCCAATATTTAGC 334
Query 20020 CTTA 20023
|||
Sbjct 333 TTTA 330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945387516964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |