Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq212 425 7e-114 seq387 113 6e-20 >seq212 Length=365203 Score = 425 bits (470), Expect = 7e-114 Identities = 1468/2279 (64%), Gaps = 43/2279 (2%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 || || ||||| | ||| | || | || || | || || ||||| || || |||| | Sbjct 167012 GTAAACTGAATAGCAGCAGCAGCAGCTTGAGTTCTTAAGTAATACATACCTGTCTTTAAA 167071 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || |||| || || |||||||| |||| || | | || ||| || Sbjct 167072 CCCTTCTTCCAACCATAGAAATGCATTGAAGTTAACTTACCCATAGTTGGGTCTTTGATG 167131 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 || ||||| | |||||| |||||| ||||| || | |||||||||||||| | ||| Sbjct 167132 TGAATATTTAAAGATTGTGATTGATCAATGAATGCAGCTCTGTCTGCAGCCATGTCAATA 167191 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAG 62088 || |||||| | ||||||||||| || || || || | ||||| || ||||||| Sbjct 167192 ATATGCTTTTGGGAAATTTCCCAAACGGTCTTGTATAAGGCCTTTAAT-TCATCTGGAAT 167250 Query 62089 GTTTGT-----ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62143 ||| | ||| |||| ||||| || | ||||| | ||||| || |||||| Sbjct 167251 GTTAGGCAAGGATT--GAATAGATCCGTTATTAGAGATAATATTGTTCTTCATATCATCA 167308 Query 62144 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 62203 ||||| | | || |||| | | | | | || || || | ||| ||||| Sbjct 167309 TTCCAGATACCTAAATCAACTAAATCACGCAATAAGTATGGGTTGACAATTTGGAATTCA 167368 Query 62204 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 62263 |||| ||| ||||| | | ||||||||| ||||| || || | | ||||| | Sbjct 167369 CCAGCCAAAACTCTTCTGGAGTAAATATTTGAAGTATATGGCTCGAAGCATTCATTGTAA 167428 Query 62264 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 62323 ||||| ||||||| |||||| ||||| ||||| || || || || ||| |||||||||| Sbjct 167429 CCCAAGATTTGAGAAGTTGAGGCAGTTGGCATTGGAGCAACTAACAAAGAATTTCTAAGA 167488 Query 62324 CCGTATGTT---CTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACA 62380 || ||| | || | ||| | ||| | || ||||| | ||| | || | ||| Sbjct 167489 CC--ATGCTTAGCTAACTTT-TGTTTCAAAGTATCCCAGTCCCATAATTCAGTTGGTTTT 167545 Query 62381 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCG 62440 ||||| ||||| ||| || ||||| |||| || | | Sbjct 167546 CTATCCCATAAATCAAATTGTAAGATACCCTTAGAAGCTGGAGATCCCTCATAGGTTTGG 167605 Query 62441 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 62500 ||||||||||| ||||||| ||| || || | ||||||| |||||| || Sbjct 167606 TATGGTCCTTCAACTTCAGCTAACTCAATGGATGCTTCGACAGCACCGTGATAAATAGTC 167665 Query 62501 TCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAAT-TTAAGAG 62559 ||||| || | |||||| || | ||||| || |||||||| |||| |||| Sbjct 167666 TCGAAAATTTGAGTATTTAATTCCTTAGCTTCTTGGGAGTCAAATGG-TAATCTTAATGC 167724 Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619 |||||||| |||||||| ||||| ||||| | | || ||||| | |||| |||| || Sbjct 167725 CATAAACGCATCTGCTAAACCTTGGACACCTAAGGCAATTGGTCTGTTTCTCATATTGGA 167784 Query 62620 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 62679 | || |||||||||| || || | ||| || |||||| | || | || | | Sbjct 167785 GTTTCTTGCTTCTGGAACTGGGTAGAAGTTACGGTCAATAATTCTGTTCAAGTTACGGGT 167844 Query 62680 AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-------------GCCCAT 62726 | || || || || | | || |||||| | | | || | Sbjct 167845 CACAACCTTAGTAACTTCATGTAACTTTTCAAAATCGTACCAACTTGAGGTACTGTCCTT 167904 Query 62727 CTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 62786 || ||||| | ||| || | || || | |||||||| || || |||| | | Sbjct 167905 CTCA-ACAAAAGAGGGCAAAGCGATGGAAGCTAAGTTACAAACAGCAACTTCATCGGGAG 167963 Query 62787 CCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTT 62846 | | |||| | || ||| || | || |||| || | |||||||| | || Sbjct 167964 CAGAGTATTCAACAATTTCACAACATAAGTTGGATGACTTAATAATACCTAAATTCTTTT 168023 Query 62847 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCT 62906 | || | ||||||||||| ||||| || || | |||||||| |||||||||||| | | Sbjct 168024 GGTTTGTTTTTTTGTTACAAGCATCTTTGTATAACATGAATGGTGTACCAGTTTCAGTTT 168083 Query 62907 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTT 62966 ||| |||| ||| || | ||| | | ||||| | | ||| | | |||| Sbjct 168084 GAGCATCTAAAATGGCGTACCATAATTTCTGCGCCTTAACAACCGATCTACCACGATTTT 168143 Query 62967 CTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAG 63026 || |||| ||| | |||||| |||||| || || || | |||| | |||| Sbjct 168144 CTTTTTCATATTTGGAGTACAATTCTTCGAATTCATCACCGTAGACATCTGATAAACCAG 168203 Query 63027 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63086 || ||||| ||| | | ||| | ||| ||||| | | | |||| ||||| || | Sbjct 168204 GAGCTTCATTTGGAGAGAACAAAGTCCAGTCTCCATTTTGTTCGACTCTCTTCATGAATA 168263 Query 63087 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63146 |||||||||||| | || |||| ||||| | ||| ||| || || || || Sbjct 168264 AATCAGGAATCCATAAGGCAGGGAATAAGTCTCTAGCTCTGATTTCTTCCTTACCATGAT 168323 Query 63147 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63206 ||||| | | ||| | ||| | | ||||| | |||||| || || ||||| | ||| | Sbjct 168324 TCTTTCTTATATCTATGAAATCAAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAA 168383 Query 63207 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63266 | || || | ||||| || || ||||| | || | ||| ||||| ||| |||| | Sbjct 168384 AGGCGCCTGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACAC 168443 Query 63267 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGG 63326 | ||| ||||| |||||||| || |||||||| || || | || || ||| | | Sbjct 168444 GTACCATAGGAATGATACCATTAGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTAG 168503 Query 63327 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 63386 |||||| || || || ||| || || || || | || || || || || ||| Sbjct 168504 AACGAATGTTGTGGATATGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATG 168563 Query 63387 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 63446 || || ||||| ||||| || || ||| || || |||| || | ||||| Sbjct 168564 TCTTCAAGGTATCGTAGATACCATCGATAGAGTCTTCTTTCATAGCAACCAAGAAACAAG 168623 Query 63447 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACC 63506 |||||| || | | | ||| || || || ||||| || || ||| ||||||| || Sbjct 168624 AAGACATCTGAGGGCTAGGAGTACCAGCGTTGAATAAAGTTGGGGAACCGTGAGTGAAAA 168683 Query 63507 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTC 63566 || ||| || | | ||||||| || ||| || || || || ||| |||| Sbjct 168684 ATCTTTGGGACATCATGTTGTACGATTCGATAACTCTTTCGATGTCATCACCATGGATTC 168743 Query 63567 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 63626 | |||||||| | ||| | || ||||| |||||||| | | ||| || ||| ||| Sbjct 168744 CGACTGCGACTCTCATAATCAAATGCTGTGGTCTTTCGGCAACCTTACCATTAATTCTCA 168803 Query 63627 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 63684 | ||||| ||| ||||||| || || || |||||||||||||| ||||| || || || Sbjct 168804 ATAAGTAAGATCTTTCCAAGGTCTTGAATCCAAAATAGTTGTAGTTGAAA--TCACGATC 168861 Query 63685 GTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG--TTAACTACATC-CATG-GTAA 63740 | | |||| | ||||| | | || || ||| | | || | ||| ||| || Sbjct 168862 AAACACAATAGCAGAGTTCAACTCAT--TTGAATTGGCTTGAATAATATCGTATGTGTCT 168919 Query 63741 TACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCT 63800 | | ||||| ||||| | ||| ||| | || || || ||||| | | || |||| Sbjct 168920 T--TGGAAATCATAGGTGAGTGTAAACCAGTCTTTGGGTTAACATATTCATACAACTCCT 168977 Query 63801 CCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAG 63860 | |||| | ||| | || | |||| ||||||| || || ||||| ||||| | Sbjct 168978 TACTGACTTGAGAGAATTGCTTGGTAGTTTGCTTGTGTAAGTTGGAAACGGCGATTCTTG 169037 Query 63861 CGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCA 63920 | || | ||| || || || || || |||||| | || || |||| || |||| Sbjct 169038 CTGCCAAAATAGCGTAGTCAGGGTGGATTGTAGTCATATAAGCAGCAGTTTCAGCAGCCA 169097 Query 63921 GAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCATAGCTA 63980 | || ||||| | || | || || | || | || |||||| || | | Sbjct 169098 AGTTATCTAATTCAATAGTGTTGACCCCTTGGTAAACACCAGAAATAACCCTCTGTGTGA 169157 Query 63981 TTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATG 64040 | || || || | || |||||| ||| |||||||||||| || || | || | Sbjct 169158 TAGCAACTGGTTCGACGTGTGCAGTGTCTAACCCATAACATAATCTTTGAACTCTAGCAG 169217 Query 64041 TGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAACATTTTT 64099 |||| || ||||| |||| ||||| ||||| || |||| ||| ||||| || Sbjct 169218 TGATCTTGTCAAAGCGGACAGGCTCCTTACGTCCATCTCTTTTATAAACATACATTATT 169276 Score = 269 bits (298), Expect = 3e-67 Identities = 598/887 (67%), Gaps = 24/887 (3%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| |||| || | |||||||| || || || || || |||| || || ||| Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||| || |||||||| |||||||| || |||| ||||| || || || | Sbjct 283059 TCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACCTTTTTGTTACCTAAGGCAACTAAT 283118 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 |||||||| || || ||||| | ||| ||| | | ||| ||||| |||| | | Sbjct 283119 AATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAATAAT 283178 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609 | ||| | ||| || | |||||||| ||| |||| || || || || ||||| Sbjct 283179 GAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGATAAT- 283237 Query 32610 GATCTT---ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 32666 |||| || | || | ||| | ||| || || | || |||||| Sbjct 283238 --TCTTTCAACAATAACTGAATCTGGTCTGTTTTGTAAGTGAGAGAATAATAAGCATGCG 283295 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 ||||| |||| ||| || || | || |||||||||||||| || || | || ||| Sbjct 283296 AAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACCAGGC 283355 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 32786 |||| || | ||| || | ||| || || || |||||||| ||| |||||||| ||| Sbjct 283356 ATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAATACCT 283415 Query 32787 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCGCTGTCATGTATCCAC 32843 || || || || ||||||| | ||| || || ||||| | | ||| ||||| Sbjct 283416 TCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGATCCAT 283475 Query 32844 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 32903 || ||||||||| |||||||| || | ||| || || | || |||||||| || | Sbjct 283476 CTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAATAAG 283535 Query 32904 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-TACATTTCCGA 32962 ||| | ||| || |||||| | || || ||||| || || | || |||| || Sbjct 283536 AAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAAT-AAGTAACGAGTAGGTTTCAGA 283594 Query 32963 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTAC 33022 || |||||||| || ||||| || |||||||| ||| | || || | ||| || || Sbjct 283595 GTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTGAAC 283654 Query 33023 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33082 ||| | | | || ||| | || ||||| || || || |||||| || ||||| || Sbjct 283655 TTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAAGAA 283714 Query 33083 CGCCAATACATGTTTT----ATAAAATATTTTTCGTCTGGTG-TTAGTTT---ATTCCAA 33134 ||||| | || | || || ||| |||||| || || ||| ||| |||||| Sbjct 283715 TGCCAAGA----TTCTAGAGATGAAGTATCTTTCGT-TGTTGTTTAATTTTTCATTCCAG 283769 Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 |||| |||| ||| || ||| | |||||| | ||||| || || || || ||||| Sbjct 283770 TCATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTC 283829 Query 33195 TTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 || ||||| | |||||| || || |||| ||||| || | ||| || Sbjct 283830 TTGTACATTTGCCAGATTTCGTGGTATTTGATTGGGAATAAAACGAA 283876 >seq387 Length=274674 Score = 113 bits (124), Expect = 6e-20 Identities = 330/507 (65%), Gaps = 11/507 (2%) Strand=Plus/Plus Query 61849 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 61908 |||||||||||| | | || | || || | |||||| ||||| || ||||| | Sbjct 209980 TGTGAATTGAATAGCCCTAGTCGCAGCTTGTGTCCTTAGATAATACATACCAGTTTTCAA 210039 Query 61909 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTAT 61968 || ||| | || ||||| | || |||| ||| | | | ||||| || Sbjct 210040 GCCTTTTTCCCAGGCATAGAAATGACTGCTTGTTAATTTACCAAAGGTTGGATCCTGTAA 210099 Query 61969 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62028 || ||||||||| ||| || || ||||| ||| || || || || | | || Sbjct 210100 ATAAATATTCATACTTTGCAGCTGGTCAATGAATTTTCCTCTATCAGCTGCTAGATCAAT 210159 Query 62029 AATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG--- 62085 |||| ||||| | ||||||||||| |||||||||| | |||| | || | ||| Sbjct 210160 AATCACTTTTTGAGAAATTTCCCAAACTGTTTTATAAAGTTGCTTCAATTCATTTGGTAT 210219 Query 62086 AAGGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62145 || | | | || ||||| ||||| | ||| || || |||| | || | ||| Sbjct 210220 AACGGGTATGTTTTGAATCGATCCGCTTTCTAAGATTATTTTATTTCTCATAGAAGAATT 210279 Query 62146 CCATAATTTTCTCTCGGTTAAAACTCT----AAGGAGATGCGGATTAACTACTTGAAATT 62201 ||| | | || ||||| | | ||| | || || ||||||||||||| Sbjct 210280 CCAGATACCTAGGTCAATTAAATCCTTCATCAAGTATTTG----TTCACTACTTGAAATT 210335 Query 62202 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 62261 ||||||| ||||| || || | || |||||| || || ||||| | | | |||||| Sbjct 210336 CTCCAGATAATACCCTTCGGTTATATATATTAGATGTGTAAGGTTCAAAACATTCATTAA 210395 Query 62262 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62321 || ||||| |||| ||||| ||||| ||||| ||||| || | ||| ||| |||| Sbjct 210396 ACCCTAAAATCTGAGATGTTGAAGCAGTAGGCATTGGTGCAACTAGTAACGAATTCCTAA 210455 Query 62322 GACCGTATGTTCTGATTTTATCTTTTA 62348 ||| |||| | |||| ||||| Sbjct 210456 CACCTATTGTTTTAGCTTTAGATTTTA 210482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628483342400