Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq11 145 7e-30 seq392 136 3e-27 seq315 113 4e-20 seq277 89.7 4e-13 >seq11 Length=459 Score = 145 bits (160), Expect = 7e-30 Identities = 173/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| ||||| | ||||| | ||||| || || ||| Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| || || || ||| | || | ||| ||||| ||||| |||||||| ||| Sbjct 397 GATACTATTGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGAC 341 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | ||||| ||||| || ||||||||||| | | | || | |||||| Sbjct 340 CAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTAC 281 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||||||||| || ||||||| || | || ||||||| || Sbjct 280 AACATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 231 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| ||||| | ||||| | ||||| || || ||| Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | ||| | || | ||| ||||| ||||| ||||| || ||||| Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 111 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | ||||| ||||| || |||||||| || | | | || | |||||||| Sbjct 110 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAA 51 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||| || | || ||||| | || ||||||| || Sbjct 50 CATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGG 3 >seq392 Length=124811 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || |||||||| || ||||| |||| || | ||||| || || || Sbjct 105028 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTC 104969 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| || ||| ||||| ||||| |||||||||||||| Sbjct 104968 AGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 104909 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || || || || || ||||||||||||| | | || | |||||||| Sbjct 104908 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTACAA 104849 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| |||||||| | || ||||| |||| ||||||| || Sbjct 104848 CATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 104801 >seq315 Length=97186 Score = 113 bits (124), Expect = 4e-20 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || ||||| ||||| |||| || | ||||| || || || Sbjct 214 ATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAATCTTCC 155 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| || || || ||| | || | ||| ||||| ||||| |||||||| ||| Sbjct 154 GATACTATTGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGAC 98 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | ||||| ||||| || |||||||| || | | | || | |||||| Sbjct 97 CAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTAC 38 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207 || |||||||||||||| || | || ||||| Sbjct 37 AACATTCAAAAAGAATCTACTTTGCACTTAGT 6 >seq277 Length=184381 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||| ||||| |||||||| |||||||| | | ||||| ||||| || |||||||| Sbjct 20 GACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAG 79 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || | | | || | |||||||| |||||||||||||| || | || ||||| | Sbjct 80 GACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 139 Query 25212 AGGCTAAGAGGAGG 25225 || ||||||| || Sbjct 140 AGATTAAGAGGTGG 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325655153860