Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq11 145 7e-30
seq392 136 3e-27
seq315 113 4e-20
seq277 89.7 4e-13
>seq11
Length=459
Score = 145 bits (160), Expect = 7e-30
Identities = 173/230 (75%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| ||||| | ||||| | ||||| || || |||
Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| ||||| || || || ||| | || | ||| ||||| ||||| |||||||| |||
Sbjct 397 GATACTATTGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGAC 341
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | ||||| ||||| || ||||||||||| | | | || | ||||||
Sbjct 340 CAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTAC 281
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||||||||| || ||||||| || | || ||||||| ||
Sbjct 280 AACATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 231
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| ||||| | ||||| | ||||| || || |||
Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| ||||| || | ||| | || | ||| ||||| ||||| ||||| || |||||
Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 111
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | ||||| ||||| || |||||||| || | | | || | ||||||||
Sbjct 110 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAA 51
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||||||||| || | || ||||| | || ||||||| ||
Sbjct 50 CATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGG 3
>seq392
Length=124811
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || |||||||| || ||||| |||| || | ||||| || || ||
Sbjct 105028 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTC 104969
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| || ||| ||||| ||||| ||||||||||||||
Sbjct 104968 AGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 104909
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | || || || || || ||||||||||||| | | || | ||||||||
Sbjct 104908 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTACAA 104849
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||| |||||||| | || ||||| |||| ||||||| ||
Sbjct 104848 CATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 104801
>seq315
Length=97186
Score = 113 bits (124), Expect = 4e-20
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || ||||| ||||| |||| || | ||||| || || ||
Sbjct 214 ATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAATCTTCC 155
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| ||||| || || || ||| | || | ||| ||||| ||||| |||||||| |||
Sbjct 154 GATACTATTGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGAC 98
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | ||||| ||||| || |||||||| || | | | || | ||||||
Sbjct 97 CAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTAC 38
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207
|| |||||||||||||| || | || |||||
Sbjct 37 AACATTCAAAAAGAATCTACTTTGCACTTAGT 6
>seq277
Length=184381
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
||||| ||||| |||||||| |||||||| | | ||||| ||||| || ||||||||
Sbjct 20 GACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAG 79
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|| | | | || | |||||||| |||||||||||||| || | || ||||| |
Sbjct 80 GACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 139
Query 25212 AGGCTAAGAGGAGG 25225
|| ||||||| ||
Sbjct 140 AGATTAAGAGGTGG 153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433325655153860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |