Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq212 284 1e-71 >seq212 Length=365203 Score = 284 bits (314), Expect = 1e-71 Identities = 633/933 (68%), Gaps = 29/933 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| ||||| |||||||| || | |||| | ||||| ||||| || |||||||| | Sbjct 282986 CATGACACCGGCCTTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGC 283045 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATACTTTTC---AC 92903 ||||| || | ||| || || || ||| || | |||| ||| ||||| || Sbjct 283046 TAAAGAAAT-GTTTTCCATAAAGTCGAATGGGTTGGTAACGTTGTAAACCTTTTTGTTAC 283104 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 | | ||||| |||||||||||||| || ||||| | ||| ||| |||| || | Sbjct 283105 CTAAGGCAACT-----AATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTT 283159 Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTAC 93021 ||| ||||| |||| | | |||| ||| || || || ||||| ||||| Sbjct 283160 ACAGTTCATACCTAATAATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGT 283219 Query 93022 AACGGCTTCTTTCAAGATTTCTATTACTCTA-CT--ATTTGGTGGTTTTTGTACGACATA 93078 ||| ||||| | | ||| | || || || || |||| ||||||| | | | Sbjct 283220 AACTGCTTCAGTGATAATTCTTTCAACAATAACTGAATCTGGTCTGTTTTGTAAGTGAGA 283279 Query 93079 ATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATT 93138 | | | |||||| || || || |||||||||||||| || || | || || || || Sbjct 283280 ---GAATAATAAGCATGCGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTT 283336 Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198 | ||| |||||||| || | | |||| ||||| | ||| || || |||||||| Sbjct 283337 GGAGAAGGTTAAACCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGA 283396 Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC 93258 |||| || || |||||||| || ||||| || || || | | |||| | || || Sbjct 283397 ACCACTGAAGAAAATACCTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGC 283456 Query 93259 GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318 || | ||||||||| ||||||||||||| || || ||||| ||||| || | ||| Sbjct 283457 ATCATCATCACTGATCCATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGA-TGT 283515 Query 93319 T-TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTA 93377 | |||||||| || |||| | | ||| || | | |||| ||||| || || || | Sbjct 283516 TGTCGATAGCATTGAATAAGAAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAATAA 283575 Query 93378 ACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATC 93437 | || || ||||||| |||| || ||||| ||||||||| |||||||||||| Sbjct 283576 GTAACGAGTAGGTTTCAGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATT 283635 Query 93438 TAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATAC 93497 | ||||| | || || ||||| ||| || | || || | ||||| ||||| |||| Sbjct 283636 TGGCTTCTGGAATTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATAC 283695 Query 93498 CATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTC-ATCATCTTTA 93556 | || || || ||||| || ||||| || || || | | | || | | |||| Sbjct 283696 CGTCAGAAGCAGCAAAGAATGCCAAGATTCTAGAGATGAAGTATCTTTCGTTGTTGTTTA 283755 Query 93557 AGCTT--ATCCCAATCGGAT-AG-ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | || || ||| || || || ||| || | ||||| ||||||| ||||||| || Sbjct 283756 ATTTTTCATTCCAGTC--ATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAA 283813 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGAC 93672 || ||||| || || |||||||| | ||| || || || |||| ||||| |||| || Sbjct 283814 GGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCGTGGTATTTGATTGGGAATAAAAC 283873 Query 93673 AAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 |||||| | ||| || ||| ||| || || Sbjct 283874 GAAACGACGGGTGTTTTCGATTAATAATGGTTC 283906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857709422560