Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq315 159 3e-34 seq11 159 3e-34 seq392 132 4e-26 seq277 116 3e-21 seq417 82.4 6e-11 >seq315 Length=97186 Score = 159 bits (176), Expect = 3e-34 Identities = 169/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 22209 ATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGT 22268 |||| |||| |||||||| || |||||||| || || ||||| || | || | ||||| Sbjct 224 ATTTATAAATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGT 165 Query 22269 GGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCC 22328 ||| | ||||||| | ||| || |||| || |||||||||||||| |||||||| Sbjct 164 CGAATCTTCCGATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCC 105 Query 22329 ACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTC 22388 ||| || |||||| | | || || ||||| || || |||||||| | ||| | || Sbjct 104 ACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATC 45 Query 22389 CGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431 ||||||||||||||||||||||| || | || ||||||||| Sbjct 44 TGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 2 >seq11 Length=459 Score = 159 bits (176), Expect = 3e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||||| || ||||| || |||| | ||||| ||| | | Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || |||| || |||||||||||||| ||||||||||| || ||| Sbjct 397 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 338 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||| || || ||||| || | ||| | || ||||||||| Sbjct 337 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAAC 278 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 |||||||||||||| || ||||||| |||||| |||| Sbjct 277 ATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATT 240 Score = 150 bits (166), Expect = 2e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||||| || ||||| || |||| | ||||| ||| | | Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || |||||||||||||| |||||||| || || ||| Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 110 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||| || || |||||||| | ||| | || ||||||||| Sbjct 109 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 50 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 |||||||||||||| || | || ||||||||| |||| Sbjct 49 ATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATT 12 >seq392 Length=124811 Score = 132 bits (146), Expect = 4e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||||||||| || || |||||||| ||||| || | || | ||||| ||| | Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| | |||| || || ||||||||||| ||||||||||| || Sbjct 104970 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 104911 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || || || || || || ||||| ||| | ||| | || |||||| Sbjct 104910 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 104851 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||||||||||| ||||||||| | || ||||| || |||| Sbjct 104850 AACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATT 104810 >seq277 Length=184381 Score = 116 bits (128), Expect = 3e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || |||||||||||||| ||||||||||| || |||||| | | || || ||||| || Sbjct 11 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAG 70 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || |||||||| | ||| | || ||||||||||||||||||||||| || | || Sbjct 71 CAATTAGAGGACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCAC 130 Query 22423 TTAGTTTTGCGATT 22436 ||||||||| |||| Sbjct 131 TTAGTTTTGAGATT 144 >seq417 Length=227 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||||| || ||||| || |||| | ||||| ||| | | Sbjct 110 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 51 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCC 22328 ||||| | ||| || |||| || |||||||||||||| |||||||| Sbjct 50 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725728746860