Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq315 159 3e-34
seq11 159 3e-34
seq392 132 4e-26
seq277 116 3e-21
seq417 82.4 6e-11
>seq315
Length=97186
Score = 159 bits (176), Expect = 3e-34
Identities = 169/223 (76%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 22209 ATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGT 22268
|||| |||| |||||||| || |||||||| || || ||||| || | || | |||||
Sbjct 224 ATTTATAAATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGT 165
Query 22269 GGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCC 22328
||| | ||||||| | ||| || |||| || |||||||||||||| ||||||||
Sbjct 164 CGAATCTTCCGATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCC 105
Query 22329 ACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTC 22388
||| || |||||| | | || || ||||| || || |||||||| | ||| | ||
Sbjct 104 ACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATC 45
Query 22389 CGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431
||||||||||||||||||||||| || | || |||||||||
Sbjct 44 TGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 2
>seq11
Length=459
Score = 159 bits (176), Expect = 3e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || ||||| || ||||| || |||| | ||||| ||| | |
Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || |||| || |||||||||||||| ||||||||||| || |||
Sbjct 397 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 338
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || || ||||| || | ||| | || |||||||||
Sbjct 337 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAAC 278
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||||||||| || ||||||| |||||| ||||
Sbjct 277 ATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATT 240
Score = 150 bits (166), Expect = 2e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || ||||| || ||||| || |||| | ||||| ||| | |
Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| | |||| || |||||||||||||| |||||||| || || |||
Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 110
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || || |||||||| | ||| | || |||||||||
Sbjct 109 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 50
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||||||||| || | || ||||||||| ||||
Sbjct 49 ATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATT 12
>seq392
Length=124811
Score = 132 bits (146), Expect = 4e-26
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| || || |||||||| ||||| || | || | ||||| ||| |
Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| | |||| || || ||||||||||| ||||||||||| ||
Sbjct 104970 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 104911
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || || || || || || ||||| ||| | ||| | || ||||||
Sbjct 104910 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 104851
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||||||||||| ||||||||| | || ||||| || ||||
Sbjct 104850 AACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATT 104810
>seq277
Length=184381
Score = 116 bits (128), Expect = 3e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| |||||||||||||| ||||||||||| || |||||| | | || || ||||| ||
Sbjct 11 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAG 70
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
|| |||||||| | ||| | || ||||||||||||||||||||||| || | ||
Sbjct 71 CAATTAGAGGACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCAC 130
Query 22423 TTAGTTTTGCGATT 22436
||||||||| ||||
Sbjct 131 TTAGTTTTGAGATT 144
>seq417
Length=227
Score = 82.4 bits (90), Expect = 6e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || ||||| || ||||| || |||| | ||||| ||| | |
Sbjct 110 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 51
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCC 22328
||||| | ||| || |||| || |||||||||||||| ||||||||
Sbjct 50 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419725728746860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |