Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq392 187 5e-42 seq11 178 2e-39 seq315 163 5e-35 seq277 132 9e-26 seq417 86.0 1e-11 >seq392 Length=124811 Score = 187 bits (206), Expect = 5e-42 Identities = 171/216 (79%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| | ||||| || ||||| ||||| ||||| || | || || |||||| Sbjct 104816 AAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCT 104875 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| || ||||| || | |||||||||||| |||||||| |||||||||||| Sbjct 104876 TCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCT 104935 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | ||||||| || || ||||||| ||||| ||||| ||||| ||||| Sbjct 104936 TGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAATGGTC 104995 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || | ||||||||||| || |||||| || Sbjct 104996 TTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 105031 >seq11 Length=459 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| || || |||||||| ||||| ||||| || | || || || || Sbjct 245 CAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTC 304 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| |||||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 305 TTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 364 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || || || || | ||||| ||||| |||||||| || Sbjct 365 TTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGT 424 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||||| || || ||||| Sbjct 425 CTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| | || || |||||||| ||||| ||||| || | || || || || Sbjct 17 CAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTC 76 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| |||||||| || | |||||||||||| || ||||| ||||||||||| Sbjct 77 CTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 136 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||||||| || || || || | ||||| ||||| |||||||| || Sbjct 137 TTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGT 196 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||||| || || ||||| Sbjct 197 CTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229 >seq315 Length=97186 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| | || || |||||||| ||||| ||||| || | || || || || Sbjct 2 CAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTC 61 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| |||||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 62 CTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 121 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || || || || | ||||| ||||| ||||| ||||| Sbjct 122 TTGAATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGT 181 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | || || ||||| || ||||| Sbjct 182 CTTACCTGTCAATGTTTTAACGAAGATTTGCAT 214 >seq277 Length=184381 Score = 132 bits (146), Expect = 9e-26 Identities = 112/138 (81%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| | || || |||||||| ||||| ||||| || | || || || || Sbjct 139 CAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTC 80 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| |||||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 79 CTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 20 Query 68369 TTGAATCTTTGCCTTGAC 68386 ||||||||| | |||||| Sbjct 19 TTGAATCTTGGACTTGAC 2 >seq417 Length=227 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 ||||| |||||||||||||||||||| | |||||| || || || || | ||||| Sbjct 1 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 60 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || || || | |||||||| || || ||||| Sbjct 61 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921617284995680