Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq11 127 2e-24 seq315 102 7e-17 seq392 100 2e-16 seq277 89.7 4e-13 >seq11 Length=459 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 228 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCA 287 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | | ||||| | ||| ||||| ||| | || | | |||||||| || Sbjct 288 GATAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGT 347 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||| || | | |||| || || | |||||| Sbjct 348 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 407 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || |||| ||| || |||||||| ||||| Sbjct 408 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| || | || |||||||||||| || | |||||||||||||||||||||||||| Sbjct 1 TACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAG 60 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | || | | || || | ||| ||||| ||| | || | | |||||||| |||| Sbjct 61 ATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAG 120 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 |||| ||||| ||||| |||||| || | | |||| || || | ||||||| Sbjct 121 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGA 180 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | ||| | || || || |||| ||| || |||||||| ||||| Sbjct 181 CTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229 >seq315 Length=97186 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 114169 TCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAAT 114228 |||||||||| || | |||||||||||||||||||||||||| | || | | | Sbjct 1 TCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGT 60 Query 114229 CTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGT 114288 | || | ||| ||||| ||| | || | | |||||||| || ||||| ||||| |||| Sbjct 61 CCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGT 120 Query 114289 CGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCG 114348 | |||||| || | | |||| || |||| |||||||| || | ||| | | Sbjct 121 CTTGAATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGG 180 Query 114349 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || |||| ||||| || || || ||||| Sbjct 181 TCTTACCTGTCAATGTTTTAACGAAGATTTGCAT 214 >seq392 Length=124811 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || | || ||| || ||||| || | || ||||| ||||||||||||||||| Sbjct 104800 ACCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGA 104859 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || | | |||||| | ||| ||||||||| |||| | | |||||||| || || Sbjct 104860 TAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGG 104919 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| ||||| || | | |||| ||||| | ||||| || Sbjct 104920 AATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAAC 104979 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || || || || | ||| || || ||||| ||||| Sbjct 104980 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 105027 >seq277 Length=184381 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || | || |||||||||||| || | |||||||||||||||||||||||||| Sbjct 154 ACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGA 95 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || | | || || | ||| ||||| ||| | || | | |||||||| || || Sbjct 94 TAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGG 35 Query 114275 AATGCCTTCTTTGTCGGCAATCTT 114298 ||| ||||| ||||| |||||| Sbjct 34 AATACCTTCCTTGTCTTGAATCTT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132126547728