Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq392 113 4e-20
seq11 113 4e-20
seq212 84.2 2e-11
>seq392
Length=124811
Score = 113 bits (124), Expect = 4e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|| || |||| |||| || ||||||||||| || || ||||| | |||| || |
Sbjct 104813 CTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCA 104872
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || ||| | || |||| ||| ||||| || ||||| ||||| ||
Sbjct 104873 TCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 104932
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| || || |||| || | || | ||||| ||||| || ||||| | ||||
Sbjct 104933 TCTTGGATCTTAGACTTGA-CGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAAT 104991
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| ||| || || |||||||||||
Sbjct 104992 GGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 105027
>seq11
Length=459
Score = 113 bits (124), Expect = 4e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| |||| || ||||| ||||| || || ||||| | |||| ||
Sbjct 15 CTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCG 74
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || ||| | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 75 TCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 134
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || |||| || | || | || || ||||| |||||||| | || |
Sbjct 135 TCTTGAATCTTGGACTTGA-CGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGAT 193
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||| || ||||||||||||||
Sbjct 194 AGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || ||||| ||||| || || ||||| | |||| ||
Sbjct 243 CTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCG 302
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || ||| | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 303 TCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTG 362
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || |||| || | || || ||||| |||||||| | || |
Sbjct 363 TCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATA 422
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||| || ||||||||||||||
Sbjct 423 GTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457
>seq212
Length=365203
Score = 84.2 bits (92), Expect = 2e-11
Identities = 205/311 (66%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 122832 GATTACGAATACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTC 122891
|||| | | ||||| |||||||||| ||| || || |||| || || | |||
Sbjct 168855 GATTTCAACTACAACTATTTTGGATTCAAGACCTTGGAAAGATCTTACTTATTGAGAATT 168796
Query 122892 GAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCAC 122951
| | ||||| |||||| | || ||| || | ||| | ||||| | || | ||
Sbjct 168795 AATGGTAAGGTTGCCGAAAGACCACAGCATTTGATTATGAGAGTCGCAGTCGGAATCCAT 168736
Query 122952 GGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACG 123011
|| |||||||||| | | |||| | ||| | ||||||| |||| |||||||||
Sbjct 168735 GGTGATGACATCGAAAGAGTTATCGAATCGTACAACATGATGTCCCAAAGATTTTTCACT 168676
Query 123012 CACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTT 123071
|||| || ||||| ||| ||| || || |||||| ||||||| |||||
Sbjct 168675 CACGGTTCCCCAACTTTATTCAACGCTGGTACTCCTAGCCCTCAGATGTCTTCTTGTTTC 168616
Query 123072 TTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCG 123131
||| | | || |||||| ||| |||||||| || || ||| || ||
Sbjct 168615 TTGGTTGCTATGAAAGAAGACTCTATCGATGGTATCTACGATACCTTGAAGACATGTGCC 168556
Query 123132 TTGATTTCCAA 123142
|||||||||||
Sbjct 168555 TTGATTTCCAA 168545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000691382240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |