Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq212 215 6e-51 seq83 84.2 3e-11 >seq212 Length=365203 Score = 215 bits (238), Expect = 6e-51 Identities = 932/1450 (64%), Gaps = 29/1450 (2%) Strand=Plus/Plus Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 || |||||||| ||||| ||||||| |||||||||||| | || ||||| || ||||| Sbjct 167402 GTATATGGCTCGAAGCATTCATTGTAACCCAAGATTTGAGAAGTTGAGGCAGTTGGCATT 167461 Query 115975 GGTGCCA-TGAGAAGGCTGTTGCGGAGACCCACCCCC-CTAATGCGTTCCTTGAGGGCGT 116032 || || | | | || | || | ||||| | |||| || || | | | Sbjct 167462 GGAGCAACTAACAAAGAATTT-CTAAGACCATGCTTAGCTAACTT-TTGTTTCAAAGTAT 167519 Query 116033 CCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090 ||||||| || || || ||| | | ||||| | |||||| || | |||||| | Sbjct 167520 CCCAGTCCCATAATTCAG--TTGGTTTTCTATCCCATAAATCAAATTGTAAGATACCCTT 167577 Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 116150 || ||||| ||||||||| | || | ||||| || ||||| || || || || | Sbjct 167578 AGAAGCTGGAGATCCCTCATAGGTTTGGTATGGTCCTTCAACTTCAGCTAACTCAATGGA 167637 Query 116151 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 116210 || |||| || ||||||| || ||||| ||||| ||| ||| | | |||| || || Sbjct 167638 TGCTTCGACAGCACCGTGATAAATAGTCTCGAAAATTTGAGTATTTAATTCCTTAGCTTC 167697 Query 116211 GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 116270 | ||| ||||| | | | | ||||| |||| || | |||||||||||| | Sbjct 167698 TTGGGAGTCAAATGGTAATCTTAATGCCATAAACGCATCTGCTAAACCTTGGACACCTAA 167757 Query 116271 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACGGGATAAAAATTCC 116329 | ||||||| | | ||||||||| || |||| || ||| || || || || || | Sbjct 167758 GGCAATTGGTCTGTTTCTCATATTGGAGTTTCTTGC-TTCTGGAACTGGGTAGAAGTTAC 167816 Query 116330 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 116389 || |||| || || | || ||| |||||||| || | |||||| | |||||| Sbjct 167817 GGTCAATAATTCTGTTCAAGTTACGGGTCACAACCTTAGTAACTTCATGTAACTTTTCAA 167876 Query 116390 AATCAAAACTGC--GAGTCTCT-TCATTGACATACTTAGGAAGG----GCGATTGACGCC 116442 |||| | | | ||| || || || || || | || || ||||| || || Sbjct 167877 AATCGTACCAACTTGAGGTACTGTCCTTCTCA-ACAAAAGAGGGCAAAGCGATGGAAGCT 167935 Query 116443 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 116502 | ||||| |||| ||||| | ||| ||| || | |||||| ||| || || Sbjct 167936 AAGTTACAAACAGCAACTTCATCGGGAGCAGAGTATTCAACAATTTCACAACATAAGTTG 167995 Query 116503 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAG 116562 || |||||| | || || |||||||| |||| ||| ||||||| ||||| ||||| Sbjct 167996 GATGACTTAATAATACCTAAATTCTTTTGGTTTGTTTTTTTGTTACAAGCATCTTTGTAT 168055 Query 116563 AGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAT-ACATCGGC 116621 | ||| |||| || || || || ||||| | | | ||| || | |||| | || || Sbjct 168056 AACATGAATGGTGTACCAGTTTCAGTTTGAGCATCTAAAATGGCGTACCATAATTTCTGC 168115 Query 116622 GGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAA 116681 | || ||| | | | || || | || || || | ||| | | || || Sbjct 168116 GCCT-TAACAACCGATCTACCACGATTTTCTTTTTCATATTTGGAGTACAATTCTTCGAA 168174 Query 116682 CTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTG 116741 || ||||| | ||||| | || || || | || |||| |||| | || ||| | Sbjct 168175 TTCATCACCGTAGACATCTGATAAACCAGGAGCTTCATTTGGAGAGAACAAAGTCCAGTC 168234 Query 116742 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 116801 ||| | || || | ||||||||| | || || ||||| | || | ||| | || Sbjct 168235 TCCATTTTGTTCGACTCTCTTCATGAATAAATCAGGAATCCATAAGGCAGGGAATAAGTC 168294 Query 116802 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 116861 | | | |||||| | || ||||| | | || | || || | |||||| Sbjct 168295 TCTAGCTCTGATTTCTTCCTTACCATGATTCTTTCTTATATCTATGAAATCAAAGATATC 168354 Query 116862 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC----GACCAGCCTGGT 116917 ||| ||||| || || | ||| | || | | | ||| | | |||| | || | Sbjct 168355 CGCATGCCATGGCTCTAAGTAAAGGGC-AAAGGCGCCTGGTCTCTTGTTACCACCTTGAT 168413 Query 116918 TTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGC 116977 ||||| | || || |||||| || || | ||| ||||||||||||| ||| | Sbjct 168414 CGACATAACGAGCAGTGTTGTTAAAAACACGTACCATAGGAATGATACCATTAGAAGTAC 168473 Query 116978 CATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATA 117036 |||| || || ||| || || | | | | | | |||||| || | ||||||| Sbjct 168474 CATTAGTACCAGCAATGTAAGCACCAG-TAGAACGAATGTTGTGGATATGTAAACCAATA 168532 Query 117037 CCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATC 117096 || || || | ||| || || || || | | | | ||||||| |||||||| Sbjct 168533 CCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTATCGTAGATACCATCGATA 168592 Query 117097 GAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCG 117156 ||||| | || | || | | ||| || ||||| || || || || ||||||||| Sbjct 168593 GAGTCTTCTTTCATAGCAACCAAGAAACAAGAAGACATCTGAGGGCTAGGAGTACCAGCG 168652 Query 117157 TTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCC 117216 ||||| | ||||| | |||| |||| | | |||||||||| | | ||| | || Sbjct 168653 TTGAATAAAGTTGGGGAACCGTGAGTGAAAAATCTTTGGGACATCATGTTGTACGATTCG 168712 Query 117217 AAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGG 117276 | || ||||| || || || || |||| || ||| | ||||| || | || Sbjct 168713 ATAACTCTTTCGATGTCATCACCATGGATTCCGACTGCGACTCTCATAATCAAATGCTGT 168772 Query 117277 GGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA-CTCTTCTCCAAGGTCTTGAG 117335 ||| |||| | |||||| | ||| | |||| |||| ||||||||||||| Sbjct 168773 GGTCTTTCGGCAACCTTACCATTAATTCTCAATAAGTAAGATCTT-TCCAAGGTCTTGAA 168831 Query 117336 ACCAAAATAG 117345 ||||||||| Sbjct 168832 TCCAAAATAG 168841 >seq83 Length=342754 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 163365 TACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGCGGTATCCAAGTTGGTGCG 163424 ||||| | || || ||||||||||| | ||||| ||| |||||| ||| || Sbjct 191569 TACGGAAGAGTTGCTCCAAGATCTGGGTTAGCTGTCAAGCACGGTATTTCTACTGGGGCT 191628 Query 163425 GGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGACAC 163484 |||||| | ||| | |||||| || |||||||| || ||||| ||||||||| ||| Sbjct 191629 GGTGTTATAGATGCTGACTACCGTGGAGAAGTCAAGGTTGTTCTTTTCAATCACTCACAA 191688 Query 163485 ATGGA-TTTCCAAATCAAAAAGG 163506 | || |||| || ||||||||| Sbjct 191689 AAAGACTTTCAAATTCAAAAAGG 191711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503795035040