Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq11 143 2e-29 seq392 125 6e-24 seq315 122 7e-23 seq277 109 4e-19 seq417 84.2 2e-11 >seq11 Length=459 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||||| ||||| | |||||||||||||| || |||||||| | Sbjct 231 CCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 290 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || ||||||||||| || || ||||| | ||||| || || ||| Sbjct 291 AAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 350 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| || || ||| | || | ||| ||||| | ||| ||| Sbjct 351 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACT 410 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || || || ||||| || ||||| || ||||| Sbjct 411 TCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | |||||||| || | |||||||||||||| || |||||||| | Sbjct 3 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 62 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || ||||||||||| || || ||||| | ||||| || || ||| Sbjct 63 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 122 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| || || || | || | ||| ||||| | ||| ||| Sbjct 123 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGACT 182 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || || || ||||| || ||||| || ||||| Sbjct 183 TCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229 >seq392 Length=124811 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||| ||||| || | ||| ||||| ||||| || |||||||| | Sbjct 104801 CCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGAT 104860 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| || ||||||||||| || || || || | ||||| || || ||| Sbjct 104861 AAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGA 104920 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || | || | |||||| || | ||| ||| Sbjct 104921 ATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAACT 104980 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || || || |||||||| || || || || ||||| Sbjct 104981 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 105027 >seq315 Length=97186 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 |||||||| || | |||||||||||||| || |||||||| | | ||||| | || Sbjct 3 AAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCC 62 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || ||||||||||| || || ||||| | ||||| || || ||||| ||||| || ||| Sbjct 63 TCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCT 122 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 ||||| || || ||| | || | ||| || || | ||| ||||| | || | || Sbjct 123 TGAATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTC 182 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || ||||| || || || ||||| Sbjct 183 TTACCTGTCAATGTTTTAACGAAGATTTGCAT 214 >seq277 Length=184381 Score = 109 bits (120), Expect = 4e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | |||||||| || | |||||||||||||| || |||||||| | Sbjct 153 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 94 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || ||||||||||| || || ||||| | ||||| || || ||| Sbjct 93 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 34 Query 101363 ATGCCTTCTTTATCTTGAATTTT 101385 || ||||| || |||||||| || Sbjct 33 ATACCTTCCTTGTCTTGAATCTT 11 >seq417 Length=227 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | |||||||| || | |||||||||||||| || |||||||| | Sbjct 112 CCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 171 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | ||||| | || || ||||||||||| || || ||||| | ||||| || || Sbjct 172 AAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGG 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276255638508