Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq387 197 7e-46
seq212 170 1e-37
>seq387
Length=274674
Score = 197 bits (218), Expect = 7e-46
Identities = 448/659 (68%), Gaps = 15/659 (2%)
Strand=Plus/Plus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
|||||| || ||| | ||| |||||||||||||||| || ||||| | | |||||||
Sbjct 211207 CCAATCTAAATCTTGTTTTACTCTCTCCATAAATAAATCGGGTATCCATAATCCATAAAA 211266
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
|||||||| |||||||| ||||| || || ||||| ||||| | |||||| | | |
Sbjct 211267 CAAATCTCTTGCTCTCATCTCTTCCTTACCATGATTTTTTTTCAAATCTAATACACTTAT 211326
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085
||| || | |||||||| || | ||| || || || || ||| || || ||
Sbjct 211327 AATGTCACAATGCCATGGCTCAATATAAATGGCGAAGGCTCCGGGTCTCTTGTTACCTCC 211386
Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145
|||||| || || || || || | ||||||||| | ||||| || ||||| ||| ||||
Sbjct 211387 TTGATCAACATACCTCGCTGTATTGTTGAAAACTCTTAACATAGGTACTAAGCCACTTGA 211446
Query 26146 AAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACC 26205
| ||| || | || ||| | ||||| | |||||||| || |||| | ||
Sbjct 211447 AGTTCCATTAGAACTCGAAATATATGATCCACTTCCTCTAATATTATGTACATGTAGTCC 211506
Query 26206 GATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAAACTGTATCGAAAATTCCTT 26264
|| || |||| || ||||| ||| | | || || ||| | | |||| || |
Sbjct 211507 TATACCTCCAGATGCCTTAGAAATTAACGCAGATTTATGTAA-TGTTTTGTAAATACCGT 211565
Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTC 26324
||| ||| ||| ||| ||| |||||||||||||||||| | || | ||||
Sbjct 211566 CTATTGAGTCATCTTCCATGGCTAGTAAAAAACAAGAAGATAAATAATTATATTTAGTTC 211625
Query 26325 CTGAATTAAATAATGTCGGTGTAGCATGAGTATAATA--TCCTTCACTCAAAGCTGTATA 26382
|||||||||||| || |||| ||||| | |||| || || || || || |||
Sbjct 211626 CTGAATTAAATAGAGTTGGTGATGCATGTATGAAATACTTCTTTGACATTAA-CT-CATA 211683
Query 26383 AGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGCTGTTCTTAACCACAT 26442
||||||| || ||| |||| | | | || | || || |||||| ||||
Sbjct 211684 GGTTTCAATCACACTATCAATATCATTACCATGAATACCTATGGCAACTCTTAAGAACAT 211743
Query 26443 ATATTGAGGTCGT-TCAATTACATTATTTTCCGCATCTCTAATCAAATAAGATTTTTCTA 26501
| | ||||| ||| ||| | || || || || || ||| |||||| || |||| |
Sbjct 211744 AAACTGAGG-CGTCTCACTAACGACATCGTC--CAACTTTAA-CAAATACGAATTTTGCA 211799
Query 26502 AAGTTTTCAATCCAAAATA-ATCATGATT-GAAATCTCTTTTTTGTACTATAATTGAAT 26558
| ||||| | |||||| || ||| ||| ||| |||||||| | |||| || ||||
Sbjct 211800 ATGTTTTAATTCCAAAGTATGTCA--ATTCGAAGTCTCTTTTGTTATCTATGATCGAAT 211856
Score = 102 bits (112), Expect = 4e-17
Identities = 305/460 (66%), Gaps = 13/460 (3%)
Strand=Plus/Plus
Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754
|| || ||||||||||| ||||||||||| || | ||| | || ||||| | |
Sbjct 210011 GTCCTTAGATAATACATACCAGTTTTCAAGCCTTTTTCCCAGGCATAGAAATGACTGCTT 210070
Query 24755 GTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGT--TCATCGATTG-AGCTTGGCAA 24811
|||| ||| ||| | ||| ||| || ||| || | |||| ||| |||| | |||
Sbjct 210071 GTTAATTTACCAAAGGTTG--GATCCTGTAAATAAATATTCATACTTTGCAGCTGGTCAA 210128
Query 24812 ACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCT 24871
|| | |||||| || |||| ||||| ||| ||| || || || || ||
Sbjct 210129 TGAATTT-TCCTCTATCAGCTGCTAGATCAATAATCACTTTTTGAGAAATTTCCCAAACT 210187
Query 24872 GTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTT 24931
||||| || | || | ||| |||| ||| | || ||||||| ||||| ||
Sbjct 210188 GTTTTATAAAGTTGCTTCAATTCATTTGGTATAACGGGTATGTTTTGAATCGATCCGCTT 210247
Query 24932 TCTCTCAATAGATTCAATCTCATATTCGGTGTCCAAAGAT-TAATTTTTTCAAGATCTCT 24990
||| | || || ||||||| | |||| | | || | | || ||| |
Sbjct 210248 TCTAAGATTATTTTATTTCTCATAGAAGAATTCCAGATACCTAGGTCAATTAA-ATCCTT 210306
Query 24991 AATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTC--TTATTGATAAG 25048
||||||| ||| || | | |||||||||||| || || |||| |||| |||
Sbjct 210307 CATCAAGTATTTGTTCACTACTTGAAATTCTCCAGATAATACCCTTCGGTTAT--ATATA 210364
Query 25049 TTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTT 25108
|| || ||| | |||||||||||||||||| ||||| || ||||| || || || ||
Sbjct 210365 TTAGATGTGTAAGGTTCAAAACATTCATTAAACCCTAAAATCTGAGATGTTGAAGCAGTA 210424
Query 25109 GGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATT 25148
|||||| ||| | || || |||||| || | ||| ||||
Sbjct 210425 GGCATTGGTGCAACTAGTAACGAATTCCTAACACC-TATT 210463
>seq212
Length=365203
Score = 170 bits (188), Expect = 1e-37
Identities = 290/418 (69%), Gaps = 2/418 (0%)
Strand=Plus/Plus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
||||||| |||| ||| ||| || ||||||| || ||| ||| ||| |||||||| ||
Sbjct 168211 ATTTGGAGAGAACAAAGTCCAGTCTCCATTTTGTTCGACTCTCTTCATGAATAAATCAGG 168270
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||| | ||| ||||| ||||| ||||| |||||||| || || ||||||||| |
Sbjct 168271 AATCCATAAGGCAGGGAATAAGTCTCTAGCTCTGATTTCTTCCTTACCATGATTCTTTCT 168330
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
|| ||||| ||||||||| ||||| | |||||||| ||||| || | ||||| ||
Sbjct 168331 TATATCTATGAAATCAAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAAAGGCGCC 168390
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
| ||| || ||||||||||| || || | ||||| | || ||||| | |||
Sbjct 168391 TGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACACGTACCAT 168450
Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187
|||| | ||| | ||| || || || | | ||| | | || || || | |||
Sbjct 168451 AGGAATGATACCATTAGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTAGAACGAAT 168510
Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAAA 26246
| ||| ||| | ||| || |||||||| | || ||||| ||||| ||| ||
Sbjct 168511 GTTGTGGATATGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAA 168570
Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304
|||||| | || || | || || ||||||| | | || |||||||||||
Sbjct 168571 -GGTATCGTAGATACCATCGATAGAGTCTTCTTTCATAGCAACCAAGAAACAAGAAGA 168627
Score = 109 bits (120), Expect = 3e-19
Identities = 152/212 (72%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
||||| |||| |||||||||||| | | |||||||| |||| || || ||||||
Sbjct 167363 AATTCACCAGCCAAAACTCTTCTGGAGTAAATATTTGAAGTATATGGCTCGAAGCATTCA 167422
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
|| | || |||||||||||||| || || ||||||||| || | ||| | ||||||
Sbjct 167423 TTGTAACCCAAGATTTGAGAAGTTGAGGCAGTTGGCATTGGAGCAACTAACAAAGAATTT 167482
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195
|| | ||||| ||| | | || |||||| || ||||||| || || || |
Sbjct 167483 CTAAGACCATGCTTAGCTAACTTTTGTTTCAAAGTATCCCAGTC----CCATAATTCAGT 167538
Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAA 25227
| | | || |||| ||||||||||||||||
Sbjct 167539 TGGTTTTC--TATCCCATAAATCAAATTGTAA 167568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038630737300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |