Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq387 197 7e-46 seq212 170 1e-37 >seq387 Length=274674 Score = 197 bits (218), Expect = 7e-46 Identities = 448/659 (68%), Gaps = 15/659 (2%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 |||||| || ||| | ||| |||||||||||||||| || ||||| | | ||||||| Sbjct 211207 CCAATCTAAATCTTGTTTTACTCTCTCCATAAATAAATCGGGTATCCATAATCCATAAAA 211266 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 |||||||| |||||||| ||||| || || ||||| ||||| | |||||| | | | Sbjct 211267 CAAATCTCTTGCTCTCATCTCTTCCTTACCATGATTTTTTTTCAAATCTAATACACTTAT 211326 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 ||| || | |||||||| || | ||| || || || || ||| || || || Sbjct 211327 AATGTCACAATGCCATGGCTCAATATAAATGGCGAAGGCTCCGGGTCTCTTGTTACCTCC 211386 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 |||||| || || || || || | ||||||||| | ||||| || ||||| ||| |||| Sbjct 211387 TTGATCAACATACCTCGCTGTATTGTTGAAAACTCTTAACATAGGTACTAAGCCACTTGA 211446 Query 26146 AAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACC 26205 | ||| || | || ||| | ||||| | |||||||| || |||| | || Sbjct 211447 AGTTCCATTAGAACTCGAAATATATGATCCACTTCCTCTAATATTATGTACATGTAGTCC 211506 Query 26206 GATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAAACTGTATCGAAAATTCCTT 26264 || || |||| || ||||| ||| | | || || ||| | | |||| || | Sbjct 211507 TATACCTCCAGATGCCTTAGAAATTAACGCAGATTTATGTAA-TGTTTTGTAAATACCGT 211565 Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTC 26324 ||| ||| ||| ||| ||| |||||||||||||||||| | || | |||| Sbjct 211566 CTATTGAGTCATCTTCCATGGCTAGTAAAAAACAAGAAGATAAATAATTATATTTAGTTC 211625 Query 26325 CTGAATTAAATAATGTCGGTGTAGCATGAGTATAATA--TCCTTCACTCAAAGCTGTATA 26382 |||||||||||| || |||| ||||| | |||| || || || || || ||| Sbjct 211626 CTGAATTAAATAGAGTTGGTGATGCATGTATGAAATACTTCTTTGACATTAA-CT-CATA 211683 Query 26383 AGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGCTGTTCTTAACCACAT 26442 ||||||| || ||| |||| | | | || | || || |||||| |||| Sbjct 211684 GGTTTCAATCACACTATCAATATCATTACCATGAATACCTATGGCAACTCTTAAGAACAT 211743 Query 26443 ATATTGAGGTCGT-TCAATTACATTATTTTCCGCATCTCTAATCAAATAAGATTTTTCTA 26501 | | ||||| ||| ||| | || || || || || ||| |||||| || |||| | Sbjct 211744 AAACTGAGG-CGTCTCACTAACGACATCGTC--CAACTTTAA-CAAATACGAATTTTGCA 211799 Query 26502 AAGTTTTCAATCCAAAATA-ATCATGATT-GAAATCTCTTTTTTGTACTATAATTGAAT 26558 | ||||| | |||||| || ||| ||| ||| |||||||| | |||| || |||| Sbjct 211800 ATGTTTTAATTCCAAAGTATGTCA--ATTCGAAGTCTCTTTTGTTATCTATGATCGAAT 211856 Score = 102 bits (112), Expect = 4e-17 Identities = 305/460 (66%), Gaps = 13/460 (3%) Strand=Plus/Plus Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754 || || ||||||||||| ||||||||||| || | ||| | || ||||| | | Sbjct 210011 GTCCTTAGATAATACATACCAGTTTTCAAGCCTTTTTCCCAGGCATAGAAATGACTGCTT 210070 Query 24755 GTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGT--TCATCGATTG-AGCTTGGCAA 24811 |||| ||| ||| | ||| ||| || ||| || | |||| ||| |||| | ||| Sbjct 210071 GTTAATTTACCAAAGGTTG--GATCCTGTAAATAAATATTCATACTTTGCAGCTGGTCAA 210128 Query 24812 ACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCT 24871 || | |||||| || |||| ||||| ||| ||| || || || || || Sbjct 210129 TGAATTT-TCCTCTATCAGCTGCTAGATCAATAATCACTTTTTGAGAAATTTCCCAAACT 210187 Query 24872 GTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTT 24931 ||||| || | || | ||| |||| ||| | || ||||||| ||||| || Sbjct 210188 GTTTTATAAAGTTGCTTCAATTCATTTGGTATAACGGGTATGTTTTGAATCGATCCGCTT 210247 Query 24932 TCTCTCAATAGATTCAATCTCATATTCGGTGTCCAAAGAT-TAATTTTTTCAAGATCTCT 24990 ||| | || || ||||||| | |||| | | || | | || ||| | Sbjct 210248 TCTAAGATTATTTTATTTCTCATAGAAGAATTCCAGATACCTAGGTCAATTAA-ATCCTT 210306 Query 24991 AATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTC--TTATTGATAAG 25048 ||||||| ||| || | | |||||||||||| || || |||| |||| ||| Sbjct 210307 CATCAAGTATTTGTTCACTACTTGAAATTCTCCAGATAATACCCTTCGGTTAT--ATATA 210364 Query 25049 TTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTT 25108 || || ||| | |||||||||||||||||| ||||| || ||||| || || || || Sbjct 210365 TTAGATGTGTAAGGTTCAAAACATTCATTAAACCCTAAAATCTGAGATGTTGAAGCAGTA 210424 Query 25109 GGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATT 25148 |||||| ||| | || || |||||| || | ||| |||| Sbjct 210425 GGCATTGGTGCAACTAGTAACGAATTCCTAACACC-TATT 210463 >seq212 Length=365203 Score = 170 bits (188), Expect = 1e-37 Identities = 290/418 (69%), Gaps = 2/418 (0%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| |||| ||| ||| || ||||||| || ||| ||| ||| |||||||| || Sbjct 168211 ATTTGGAGAGAACAAAGTCCAGTCTCCATTTTGTTCGACTCTCTTCATGAATAAATCAGG 168270 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||| | ||| ||||| ||||| ||||| |||||||| || || ||||||||| | Sbjct 168271 AATCCATAAGGCAGGGAATAAGTCTCTAGCTCTGATTTCTTCCTTACCATGATTCTTTCT 168330 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 || ||||| ||||||||| ||||| | |||||||| ||||| || | ||||| || Sbjct 168331 TATATCTATGAAATCAAAGATATCCGCATGCCATGGCTCTAAGTAAAGGGCAAAGGCGCC 168390 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | ||| || ||||||||||| || || | ||||| | || ||||| | ||| Sbjct 168391 TGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTAAAAACACGTACCAT 168450 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 |||| | ||| | ||| || || || | | ||| | | || || || | ||| Sbjct 168451 AGGAATGATACCATTAGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTAGAACGAAT 168510 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAAA 26246 | ||| ||| | ||| || |||||||| | || ||||| ||||| ||| || Sbjct 168511 GTTGTGGATATGTAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAA 168570 Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 |||||| | || || | || || ||||||| | | || ||||||||||| Sbjct 168571 -GGTATCGTAGATACCATCGATAGAGTCTTCTTTCATAGCAACCAAGAAACAAGAAGA 168627 Score = 109 bits (120), Expect = 3e-19 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 ||||| |||| |||||||||||| | | |||||||| |||| || || |||||| Sbjct 167363 AATTCACCAGCCAAAACTCTTCTGGAGTAAATATTTGAAGTATATGGCTCGAAGCATTCA 167422 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 || | || |||||||||||||| || || ||||||||| || | ||| | |||||| Sbjct 167423 TTGTAACCCAAGATTTGAGAAGTTGAGGCAGTTGGCATTGGAGCAACTAACAAAGAATTT 167482 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195 || | ||||| ||| | | || |||||| || ||||||| || || || | Sbjct 167483 CTAAGACCATGCTTAGCTAACTTTTGTTTCAAAGTATCCCAGTC----CCATAATTCAGT 167538 Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAA 25227 | | | || |||| |||||||||||||||| Sbjct 167539 TGGTTTTC--TATCCCATAAATCAAATTGTAA 167568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038630737300