Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq212 235 8e-57
seq11 159 5e-34
seq392 143 4e-29
seq315 138 2e-27
seq277 98.7 1e-15
>seq212
Length=365203
Score = 235 bits (260), Expect = 8e-57
Identities = 571/855 (67%), Gaps = 22/855 (3%)
Strand=Plus/Plus
Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920
|| |||| ||| || | ||| | || |||||||| || |||||||| | || || ||
Sbjct 282996 GCCTTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATG 283055
Query 17921 AAATTCATAAAATCAAATGGATTAGTG--GTTTTATAATATTTTTCTTGTATTAATTCGT 17978
| |||||| || ||||| || || ||| || || ||||| || | || |
Sbjct 283056 TTTTCCATAAAGTCGAATGGGTTGGTAACGTTGTA-AACCTTTTTGTTACCT-AAGGCAA 283113
Query 17979 ATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038
|||||||||||| || || ||||| || ||||| |||| || | || ||||||||||
Sbjct 283114 CTAATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTA 283173
Query 18039 GTAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTA 18098
|| | || |||| |||||||| | ||||||||| || || ||| | || | |
Sbjct 283174 ATAATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGA 283233
Query 18099 TTATGTTTATTACCCTA---GATTTTGGCAATTTATTAATTATGTGATTATAATATAATA 18155
| || || || || || | ||| | | || || |||| | ||||||
Sbjct 283234 TAATTCTTTCAACAATAACTGAATCTGG---TCTGTTTTGTAAGTGAG---AGAATAATA 283287
Query 18156 AACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTA 18215
| || || |||||||| |||||||||||||| | | ||||||||||| || ||||
Sbjct 283288 AGCATGCGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTA 283347
Query 18216 ACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGA 18275
| || ||||||| |||||| || |||| ||| || || || || || || | ||||
Sbjct 283348 AACCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGA 283407
Query 18276 ATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGC-AAAACTGTATTTATTGCTC 18334
| ||||| ||||| ||||| || | ||||||||| | || | | | | | ||
Sbjct 283408 AAATACCTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCA--TCATCATC 283465
Query 18335 AGT-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGC 18393
| | |||||| || ||||| || | | ||||| || || | || |||||
Sbjct 283466 ACTGATCCATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGC 283525
Query 18394 ATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATA 18453
||| || || ||| ||| || | |||||| || |||||||| || | || || ||
Sbjct 283526 ATTGAATAAGAAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAATAAGTAACGAGTA 283585
Query 18454 CATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGG 18513
||||||| || ||| ||||||| || || |||| || || || | || || ||
Sbjct 283586 GGTTTCAGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGG 283645
Query 18514 ATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573
| ||||| || | | || |||| ||||| || || || || |||||||||| ||
Sbjct 283646 AATTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGC 283705
Query 18574 TGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGAGATT---GT 18629
|| || |||||||| | | | | ||||| | | |||| || | || | || |
Sbjct 283706 AGCAAAGAATGCCAAGA-TTCTAGAGATGAAGTATCTTTCGTTGTTGTTTAATTTTTCAT 283764
Query 18630 TCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGG 18689
|||| |||| |||| || || ||| | |||||| | ||||| || || | ||| |
Sbjct 283765 TCCAGTCATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAG 283824
Query 18690 CCTGTTTGTACATTT 18704
||| ||||||||||
Sbjct 283825 CCTTCTTGTACATTT 283839
>seq11
Length=459
Score = 159 bits (176), Expect = 5e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| || || ||||| || |||||||||||| ||||
Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||||| || || || ||||| || ||||| || |||||||| |||
Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 110
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||||||||||| | || || ||||| ||||| ||||| ||
Sbjct 109 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 50
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | || ||||| || ||||||||||| |||
Sbjct 49 ATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGT 2
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| || || ||||| || |||||||||||| ||||
Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || || || || || ||||| || ||||| || || ||||| |||
Sbjct 397 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 338
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||||||||||| | ||||| ||||| ||||| ||||| ||
Sbjct 337 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAAC 278
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | ||||| || || ||||||||||| |||
Sbjct 277 ATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGT 230
>seq392
Length=124811
Score = 143 bits (158), Expect = 4e-29
Identities = 173/233 (74%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| || | || || || ||||| || || ||||| |||||||| ||| |
Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | |||| ||||| || ||| || ||||| || ||||| || || || ||
Sbjct 104970 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 104911
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
||||||||||| || | || |||||||| | |||||| ||||| ||||| |||||
Sbjct 104910 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 104851
Query 156000 AATATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || || |||| | | || | || ||||| |||||||||||||| ||||
Sbjct 104850 AACAT-TCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGGTG 104799
>seq315
Length=97186
Score = 138 bits (152), Expect = 2e-27
Identities = 144/188 (77%), Gaps = 1/188 (1%)
Strand=Plus/Minus
Query 155818 ATAAA-ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAA 155876
||||| |||||||| || ||||||||||||| || || || ||||| ||||||||||||
Sbjct 220 ATAAATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAA 161
Query 155877 GATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCA 155936
||| |||| |||| || || || || || ||||| || ||||| || || |||
Sbjct 160 TCTTCCGATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCA 101
Query 155937 GAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGAT 155996
|| |||||||||||||||| ||||||||||| | || || ||||| ||||| |||
Sbjct 100 GACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGAT 41
Query 155997 TATAATAT 156004
|| || ||
Sbjct 40 TACAACAT 33
>seq277
Length=184381
Score = 98.7 bits (108), Expect = 1e-15
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966
|| || ||||| || ||||| || || ||||| |||||||||||||||| |||||||||
Sbjct 11 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAG 70
Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCAT 156026
|| | || || ||||| ||||| ||||| || || ||||| | || | ||
Sbjct 71 CAATTAGAGGACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCAC 130
Query 156027 TTAGTGTTAAGATTAAGAGGCGGT 156050
||||| || ||||||||||| |||
Sbjct 131 TTAGTTTTGAGATTAAGAGGTGGT 154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731867938110400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |