Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq212 235 8e-57 seq11 159 5e-34 seq392 143 4e-29 seq315 138 2e-27 seq277 98.7 1e-15 >seq212 Length=365203 Score = 235 bits (260), Expect = 8e-57 Identities = 571/855 (67%), Gaps = 22/855 (3%) Strand=Plus/Plus Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920 || |||| ||| || | ||| | || |||||||| || |||||||| | || || || Sbjct 282996 GCCTTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATG 283055 Query 17921 AAATTCATAAAATCAAATGGATTAGTG--GTTTTATAATATTTTTCTTGTATTAATTCGT 17978 | |||||| || ||||| || || ||| || || ||||| || | || | Sbjct 283056 TTTTCCATAAAGTCGAATGGGTTGGTAACGTTGTA-AACCTTTTTGTTACCT-AAGGCAA 283113 Query 17979 ATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038 |||||||||||| || || ||||| || ||||| |||| || | || |||||||||| Sbjct 283114 CTAATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTA 283173 Query 18039 GTAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTA 18098 || | || |||| |||||||| | ||||||||| || || ||| | || | | Sbjct 283174 ATAATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGA 283233 Query 18099 TTATGTTTATTACCCTA---GATTTTGGCAATTTATTAATTATGTGATTATAATATAATA 18155 | || || || || || | ||| | | || || |||| | |||||| Sbjct 283234 TAATTCTTTCAACAATAACTGAATCTGG---TCTGTTTTGTAAGTGAG---AGAATAATA 283287 Query 18156 AACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTA 18215 | || || |||||||| |||||||||||||| | | ||||||||||| || |||| Sbjct 283288 AGCATGCGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTA 283347 Query 18216 ACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGA 18275 | || ||||||| |||||| || |||| ||| || || || || || || | |||| Sbjct 283348 AACCAGGCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGA 283407 Query 18276 ATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGC-AAAACTGTATTTATTGCTC 18334 | ||||| ||||| ||||| || | ||||||||| | || | | | | | || Sbjct 283408 AAATACCTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCA--TCATCATC 283465 Query 18335 AGT-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGC 18393 | | |||||| || ||||| || | | ||||| || || | || ||||| Sbjct 283466 ACTGATCCATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGC 283525 Query 18394 ATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATA 18453 ||| || || ||| ||| || | |||||| || |||||||| || | || || || Sbjct 283526 ATTGAATAAGAAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAATAAGTAACGAGTA 283585 Query 18454 CATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGG 18513 ||||||| || ||| ||||||| || || |||| || || || | || || || Sbjct 283586 GGTTTCAGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGG 283645 Query 18514 ATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573 | ||||| || | | || |||| ||||| || || || || |||||||||| || Sbjct 283646 AATTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGC 283705 Query 18574 TGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGAGATT---GT 18629 || || |||||||| | | | | ||||| | | |||| || | || | || | Sbjct 283706 AGCAAAGAATGCCAAGA-TTCTAGAGATGAAGTATCTTTCGTTGTTGTTTAATTTTTCAT 283764 Query 18630 TCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGG 18689 |||| |||| |||| || || ||| | |||||| | ||||| || || | ||| | Sbjct 283765 TCCAGTCATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAG 283824 Query 18690 CCTGTTTGTACATTT 18704 ||| |||||||||| Sbjct 283825 CCTTCTTGTACATTT 283839 >seq11 Length=459 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||| || || ||||| || |||||||||||| |||| Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||| || || || ||||| || ||||| || |||||||| ||| Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 110 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||||||||||| | || || ||||| ||||| ||||| || Sbjct 109 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 50 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || | || ||||| || ||||||||||| ||| Sbjct 49 ATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGT 2 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || ||||| || || ||||| || |||||||||||| |||| Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || || || || ||||| || ||||| || || ||||| ||| Sbjct 397 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 338 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||||||||||| | ||||| ||||| ||||| ||||| || Sbjct 337 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAAC 278 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || | ||||| || || ||||||||||| ||| Sbjct 277 ATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGT 230 >seq392 Length=124811 Score = 143 bits (158), Expect = 4e-29 Identities = 173/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 ||||||||||| || | || || || ||||| || || ||||| |||||||| ||| | Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | |||| ||||| || ||| || ||||| || ||||| || || || || Sbjct 104970 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 104911 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||||||||| || | || |||||||| | |||||| ||||| ||||| ||||| Sbjct 104910 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 104851 Query 156000 AATATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || || || |||| | | || | || ||||| |||||||||||||| |||| Sbjct 104850 AACAT-TCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGGTG 104799 >seq315 Length=97186 Score = 138 bits (152), Expect = 2e-27 Identities = 144/188 (77%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 155818 ATAAA-ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAA 155876 ||||| |||||||| || ||||||||||||| || || || ||||| |||||||||||| Sbjct 220 ATAAATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAA 161 Query 155877 GATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCA 155936 ||| |||| |||| || || || || || ||||| || ||||| || || ||| Sbjct 160 TCTTCCGATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCA 101 Query 155937 GAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGAT 155996 || |||||||||||||||| ||||||||||| | || || ||||| ||||| ||| Sbjct 100 GACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGAT 41 Query 155997 TATAATAT 156004 || || || Sbjct 40 TACAACAT 33 >seq277 Length=184381 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966 || || ||||| || ||||| || || ||||| |||||||||||||||| ||||||||| Sbjct 11 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAG 70 Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCAT 156026 || | || || ||||| ||||| ||||| || || ||||| | || | || Sbjct 71 CAATTAGAGGACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCAC 130 Query 156027 TTAGTGTTAAGATTAAGAGGCGGT 156050 ||||| || ||||||||||| ||| Sbjct 131 TTAGTTTTGAGATTAAGAGGTGGT 154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731867938110400