Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq212 172 1e-37
seq392 163 6e-35
seq315 141 2e-28
seq11 136 8e-27
seq277 93.3 8e-14
>seq212
Length=365203
Score = 172 bits (190), Expect = 1e-37
Identities = 475/730 (65%), Gaps = 8/730 (1%)
Strand=Plus/Plus
Query 49646 TAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAA 49705
|||||||||||| || || |||||||| ||||| ||||||| | ||| |||||||| ||
Sbjct 283115 TAATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAA 283174
Query 49706 TAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaat 49765
|||| | |||||| |||||| | | |||||||||||| || || |||| | ||
Sbjct 283175 TAATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGAT 283234
Query 49766 tatcataattatattattttttgataatttatatttaatatgattcgcatatattaaACA 49825
|| | || | || | || | | ||| || | | | ||| ||| ||
Sbjct 283235 AATTCT--TTCAACAATAACTGAATCTGGTCTGTTTTGTAAG-TGAGAGAATAATAAGCA 283291
Query 49826 TGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 49885
||| ||||||||||||||||| || || | | | || ||||| || || ||||| ||
Sbjct 283292 TGCGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACC 283351
Query 49886 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 49945
|||||||| |||||||| || | ||| || || || ||||| || | ||||| ||
Sbjct 283352 AGGCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAAT 283411
Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATAT 50005
||| || ||| || || || | || |||| | || || | | |||||| ||
Sbjct 283412 ACCTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGAT 283471
Query 50006 CCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 50065
||| ||| ||||||||| || || || |||||| | || || || || ||||| || ||
Sbjct 283472 CCATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAA 283531
Query 50066 TAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125
||| | | ||| | || | ||| || || ||||
Sbjct 283532 TAAGAAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAATAAGTAACGAGTAGGTTTC 283591
Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185
||| || | |||||| ||||| || || || | | ||||||| | ||
Sbjct 283592 AGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTG 283651
Query 50186 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 50245
|||||| | | |||| |||||| || || || |||||||| ||||| || || ||
Sbjct 283652 AACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAA 283711
Query 50246 GAATGCTAAAACGTATTTA-ATAAAATGTTTTTCATTATCTTTTAAATTTTC---CCAAG 50301
|||||| || | | | | || || | | |||| || | ||||| ||||| |||
Sbjct 283712 GAATGCCAAGA-TTCTAGAGATGAAGTATCTTTCGTTGTTGTTTAATTTTTCATTCCAGT 283770
Query 50302 ATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTT 50361
| | ||| || |||||| | |||||| ||||| || || ||| | | || |
Sbjct 283771 CATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCT 283830
Query 50362 TATACATTTG 50371
| ||||||||
Sbjct 283831 TGTACATTTG 283840
>seq392
Length=124811
Score = 163 bits (180), Expect = 6e-35
Identities = 177/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
||||||||| | | ||| ||||| || || || | || ||| || || || |||||||
Sbjct 104800 ACCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGA-ATGTTGTAATCAG 104858
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
|||| |||| |||| || ||||| |||||||| ||||||||||| ||||| |||||||
Sbjct 104859 ATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTG 104918
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || ||||| || ||||| || ||| || || || |||| ||||| ||||| |
Sbjct 104919 GAATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAA 104978
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|||||| |||||||| ||||||||||| || || | || || ||||||||
Sbjct 104979 CTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105030
>seq315
Length=97186
Score = 141 bits (156), Expect = 2e-28
Identities = 163/218 (75%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384
|| ||||| || ||||||| ||||| || || ||||||||||| |||| | ||
Sbjct 3 AAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCC 62
Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444
|| ||||| ||||| || || || ||||| ||||| || ||||| || ||||| || |||
Sbjct 63 TCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCT 122
Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504
|| || || || ||||| |||| ||| || ||||| ||||||| ||||||||
Sbjct 123 TGAATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTC 182
Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT-TTTAT 192541
||||| || |||||||||| || || ||||| |||||
Sbjct 183 TTACCTGTCAATGTTTTAACGAAGATTTGCATATTTAT 220
>seq11
Length=459
Score = 136 bits (150), Expect = 8e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || ||||||||||||| ||||| || || ||||||
Sbjct 228 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCA 287
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
||||| |||| | || || ||||| ||||| || || || ||||| ||||| || |||
Sbjct 288 GATAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGT 347
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || ||||| |||| ||| || |||||
Sbjct 348 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 407
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| || || || ||||| || || || || | ||| || |||||
Sbjct 408 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457
Score = 120 bits (132), Expect = 6e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367
|||||||||| | | || ||||| || ||||||| ||||| || || |||||||
Sbjct 1 TACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAG 60
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
|||| |||| | || || ||||| ||||| || || || ||||| ||||| || || |
Sbjct 61 ATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAG 120
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || ||||| || ||||| || || || || || |||| ||| || ||||| |
Sbjct 121 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGA 180
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|||||| || || || ||||| || || || || | ||| || |||||
Sbjct 181 CTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229
>seq277
Length=184381
Score = 93.3 bits (102), Expect = 8e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || ||||| || ||||||| ||||| || || ||||||||
Sbjct 154 ACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGA 95
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| | || || ||||| ||||| || || || ||||| ||||| || |||||
Sbjct 94 TAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGG 35
Query 192429 TATTCCTTCTTTATCTTGTATTTT 192452
|| ||||| || ||||| || ||
Sbjct 34 AATACCTTCCTTGTCTTGAATCTT 11
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984474399539400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |