Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq212 172 1e-37 seq392 163 6e-35 seq315 141 2e-28 seq11 136 8e-27 seq277 93.3 8e-14 >seq212 Length=365203 Score = 172 bits (190), Expect = 1e-37 Identities = 475/730 (65%), Gaps = 8/730 (1%) Strand=Plus/Plus Query 49646 TAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAA 49705 |||||||||||| || || |||||||| ||||| ||||||| | ||| |||||||| || Sbjct 283115 TAATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAA 283174 Query 49706 TAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaat 49765 |||| | |||||| |||||| | | |||||||||||| || || |||| | || Sbjct 283175 TAATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGAT 283234 Query 49766 tatcataattatattattttttgataatttatatttaatatgattcgcatatattaaACA 49825 || | || | || | || | | ||| || | | | ||| ||| || Sbjct 283235 AATTCT--TTCAACAATAACTGAATCTGGTCTGTTTTGTAAG-TGAGAGAATAATAAGCA 283291 Query 49826 TGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 49885 ||| ||||||||||||||||| || || | | | || ||||| || || ||||| || Sbjct 283292 TGCGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACC 283351 Query 49886 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 49945 |||||||| |||||||| || | ||| || || || ||||| || | ||||| || Sbjct 283352 AGGCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAAT 283411 Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATAT 50005 ||| || ||| || || || | || |||| | || || | | |||||| || Sbjct 283412 ACCTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGAT 283471 Query 50006 CCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 50065 ||| ||| ||||||||| || || || |||||| | || || || || ||||| || || Sbjct 283472 CCATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAA 283531 Query 50066 TAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125 ||| | | ||| | || | ||| || || |||| Sbjct 283532 TAAGAAGTCTGCTTCCTTTGGATCTTTGATGTAAGTGTCAATAAGTAACGAGTAGGTTTC 283591 Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185 ||| || | |||||| ||||| || || || | | ||||||| | || Sbjct 283592 AGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACATTTGGCTTCTGGAATTTG 283651 Query 50186 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 50245 |||||| | | |||| |||||| || || || |||||||| ||||| || || || Sbjct 283652 AACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCGTTGACAATACCGTCAGAAGCAGCAAA 283711 Query 50246 GAATGCTAAAACGTATTTA-ATAAAATGTTTTTCATTATCTTTTAAATTTTC---CCAAG 50301 |||||| || | | | | || || | | |||| || | ||||| ||||| ||| Sbjct 283712 GAATGCCAAGA-TTCTAGAGATGAAGTATCTTTCGTTGTTGTTTAATTTTTCATTCCAGT 283770 Query 50302 ATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTT 50361 | | ||| || |||||| | |||||| ||||| || || ||| | | || | Sbjct 283771 CATGAGTATCCTTACCTAAATCGATTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCT 283830 Query 50362 TATACATTTG 50371 | |||||||| Sbjct 283831 TGTACATTTG 283840 >seq392 Length=124811 Score = 163 bits (180), Expect = 6e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 ||||||||| | | ||| ||||| || || || | || ||| || || || ||||||| Sbjct 104800 ACCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGA-ATGTTGTAATCAG 104858 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 |||| |||| |||| || ||||| |||||||| ||||||||||| ||||| ||||||| Sbjct 104859 ATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTG 104918 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || ||||| || ||||| || ||| || || || |||| ||||| ||||| | Sbjct 104919 GAATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAA 104978 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 |||||| |||||||| ||||||||||| || || | || || |||||||| Sbjct 104979 CTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105030 >seq315 Length=97186 Score = 141 bits (156), Expect = 2e-28 Identities = 163/218 (75%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || ||||| || ||||||| ||||| || || ||||||||||| |||| | || Sbjct 3 AAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCC 62 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 || ||||| ||||| || || || ||||| ||||| || ||||| || ||||| || ||| Sbjct 63 TCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCT 122 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || || || || ||||| |||| ||| || ||||| ||||||| |||||||| Sbjct 123 TGAATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTC 182 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT-TTTAT 192541 ||||| || |||||||||| || || ||||| ||||| Sbjct 183 TTACCTGTCAATGTTTTAACGAAGATTTGCATATTTAT 220 >seq11 Length=459 Score = 136 bits (150), Expect = 8e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || ||||||||||||| ||||| || || |||||| Sbjct 228 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCA 287 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| |||| | || || ||||| ||||| || || || ||||| ||||| || ||| Sbjct 288 GATAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGT 347 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| |||| ||| || ||||| Sbjct 348 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 407 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || || || ||||| || || || || | ||| || ||||| Sbjct 408 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457 Score = 120 bits (132), Expect = 6e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367 |||||||||| | | || ||||| || ||||||| ||||| || || ||||||| Sbjct 1 TACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAG 60 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 |||| |||| | || || ||||| ||||| || || || ||||| ||||| || || | Sbjct 61 ATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAG 120 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || ||||| || ||||| || || || || || |||| ||| || ||||| | Sbjct 121 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGA 180 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||||| || || || ||||| || || || || | ||| || ||||| Sbjct 181 CTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229 >seq277 Length=184381 Score = 93.3 bits (102), Expect = 8e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || ||||| || ||||||| ||||| || || |||||||| Sbjct 154 ACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGA 95 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| | || || ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 94 TAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGG 35 Query 192429 TATTCCTTCTTTATCTTGTATTTT 192452 || ||||| || ||||| || || Sbjct 34 AATACCTTCCTTGTCTTGAATCTT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984474399539400