Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq212 196 9e-45
seq392 165 1e-35
seq11 149 1e-30
seq417 89.7 9e-13
>seq212
Length=365203
Score = 196 bits (216), Expect = 9e-45
Identities = 373/543 (69%), Gaps = 11/543 (2%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||| |||| | |||||||| ||||| || ||||| |||| || ||
Sbjct 282999 TTTTGGTAGTCACTAACTCTCTTTTCGAAGAAGTTGGTCTTTCCGGCTAAAGAAATGTTT 283058
Query 38892 TTCATAAAATCAAATGGATTTTTGGTA---TTATAATATTTTTCTCCTATC-AATACATA 38947
| |||||| || ||||| || |||| || ||| |||| | || | || ||
Sbjct 283059 TCCATAAAGTCGAATGGGTT---GGTAACGTTGTAAACCTTTT-TGTTACCTAAGGCAAC 283114
Query 38948 TAATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAA 39007
|||||||||||| || || |||||||| ||||| ||||||| | ||| |||||||| ||
Sbjct 283115 TAATAATCTATCAGCAACGAATTCAACGTATTGACACATTAAGTTACAGTTCATACCTAA 283174
Query 39008 TAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaat 39067
|||| | |||||| |||||| | | |||||||||||| || || |||| | ||
Sbjct 283175 TAATGAGATTGGTAAAGCATCAACGAAAAATTCTTTTTCGATAGTAACTGCTTCAGTGAT 283234
Query 39068 tatcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACA 39127
|| | || | || | || | | ||| || | | | ||| ||| ||
Sbjct 283235 AAT--TCTTTCAACAATAACTGAATCTGGTCTGTTTTGTAAG-TGAGAGAATAATAAGCA 283291
Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187
||| ||||| |||||||||||||| || | | | || ||||| || || ||||| ||
Sbjct 283292 TGCGAAATCAGTATGTAAACCTTCATCACGACAGATTAATTCGTTGGAGAAGGTTAAACC 283351
Query 39188 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 39247
|||||||| |||||||| || | ||| || || || ||||| || | ||||| ||
Sbjct 283352 AGGCATTAAACCTCTCTTCTTTAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAAAT 283411
Query 39248 ACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAAT 39307
||| || ||| || || || | || |||| | || || | | |||||| ||
Sbjct 283412 ACCTTCAACAGCTGCGAAGGCAACTAATCTTTCGCCGAATAACGCATCATCATCACTGAT 283471
Query 39308 CCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 39367
||| ||| |||||||| || || || |||||| | || || || || ||||| || ||
Sbjct 283472 CCATCTTAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGTTGTCGATAGCATTGAA 283531
Query 39368 TAA 39370
|||
Sbjct 283532 TAA 283534
>seq392
Length=124811
Score = 165 bits (182), Expect = 1e-35
Identities = 180/239 (75%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || ||| ||||| || || || | || || ||| ||
Sbjct 104792 TTCTTACCACCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTG 104851
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
||||| ||||| | || | || || ||||| |||||||| || |||||||| ||||||
Sbjct 104852 TAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGG 104911
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || ||| || || || ||||| |||||
Sbjct 104912 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAA 104971
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||||| |||||||| ||||||||||| || || | ||| || ||||||||
Sbjct 104972 GATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105030
>seq11
Length=459
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || ||||||||||||| ||||| ||| || |||||
Sbjct 228 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCA 287
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || |||| || ||||| ||||| || ||||| ||||| |||||||| |||
Sbjct 288 GATAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGT 347
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || ||||| |||||||| || |||||
Sbjct 348 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 407
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| || || || ||||| || || || || | || || |||||
Sbjct 408 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457
>seq417
Length=227
Score = 89.7 bits (98), Expect = 9e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || ||||| || ||||||| ||||| ||| || |||||
Sbjct 109 ATACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCA 168
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958
||||| | || |||| || ||||| ||||| || ||||| ||||| |||||||| ||
Sbjct 169 GATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGG 227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905130976495200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |