Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq387 176 1e-38 seq418 154 4e-32 seq212 134 4e-26 seq381 123 7e-23 >seq387 Length=274674 Score = 176 bits (194), Expect = 1e-38 Identities = 551/844 (65%), Gaps = 17/844 (2%) Strand=Plus/Plus Query 155600 ATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTCACAGCACAGGTTA 155657 |||||| ||||| || || | | | || || ||||| ||||| |||||||| |||||| Sbjct 210916 ATTACAAACCGCTGTTTCTTCG--GGCGATGAATATTCAACAATTTCACAGCAAAGGTTA 210973 Query 155658 GAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTAT 155717 || || || || ||||| ||||| ||||| ||||| || ||||| ||||| || | Sbjct 210974 GATGATTTAATAGTCCCTAAGTTCTTTTGGTTCGATTTTCTATTACATGCATCTTTAAAC 211033 Query 155718 AGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGG 155777 | || || ||| || || || | || || ||||| |||| | | | Sbjct 211034 AACATATAAGGGCCACCAGTTTCGGTTTGGCACTCTAGAATTGCACGCCATAATTTTTGT 211093 Query 155778 GCATTAATTTGCTTGTTGTATCTGCCTTCC-GA---CTCATATTTCATATACAGCGTTCG 155833 || ||||| | | ||| || || |||| || |||||| || || || ||| Sbjct 211094 GCTTTAAT--GGTAGTTATAGCTT--TTCCTGATCTCTCATACTTTTCGTAGAGATTTCT 211149 Query 155834 GTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCA 155893 |||| || || || |||||||| | |||||||| ||| ||| |||| |||||||| Sbjct 211150 AAAATCATCGCCATAGCAATCACTTAATCCAGGGCTAACATCAGGGGAAAAGAGCGACCA 211209 Query 155894 AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAG 155953 | | || |||| | ||||||||||| ||| ||| | |||| || | Sbjct 211210 ATCTAAATCTTGTTTTACTCTCTCCATAAATAAATCGGGTATCCATAATCCATAAAACAA 211269 Query 155954 GTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGA-ATTCCTCAA 156012 || ||||| | ||| || | || ||||| || | ||||| | | | | || Sbjct 211270 ATCTCTTGCTCTCATCTCTTCCTTACCATGATTTTTTTTCAAATCTAATACACTTAT-AA 211328 Query 156013 TATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCT 156069 | ||| ||| |||||| | ||| || || || || |||||| || || | Sbjct 211329 TGTCACAATGCCATGGCTCAATATAAATGGCGAAGGCTCCGGGTCTCTTGTTACCTCCTT 211388 Query 156070 GATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAG 156129 |||| ||||||| || || || ||||| || | || |||||| | | ||| | |||| Sbjct 211389 GATCAACATACCTCGCTGTATTGTTGAAAACTCTTAACATAGGTACTAAGCCACTTGAAG 211448 Query 156130 TGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAA 156189 | ||||| | | ||||| || ||| | | || |||||| | ||||||||| | Sbjct 211449 TTCCATTAGAACTCGAAATATATGATCCACTTCCTCTAATATTATGTACATGTAGTCCTA 211508 Query 156190 TACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAA 156249 |||| || || ||||||||| || ||| | || || ||| ||||||| || | Sbjct 211509 TACCTCCAGATGCCTTAGAAATTAACGCAGATTTATGTAATGTTTTGTAAATACCGTCTA 211568 Query 156250 TAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAG 156309 | || ||||||||||| | ||||| | | || ||| ||| | | | ||||| | Sbjct 211569 TTGAGTCATCTTCCATGGCTAGTAAAAAACAAGAAGATAAATAATTATATTTAGTTCCTG 211628 Query 156310 CGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCT 156369 || ||||| || |||| |||||| || |||||||| || ||||| | || || || | Sbjct 211629 AATTAAATAGAGTTGGTGATGCATGTATGAAATACTTCTTTGACATTAACTCATAGGTTT 211688 Query 156370 CCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCT 156429 | | | | |||| || | || ||||||| || | || || | ||||| || Sbjct 211689 CAATCACACTATCAATATCATTACCATGAATACCTATGGCAACTCTTAAGAACATAAACT 211748 Query 156430 GAGG 156433 |||| Sbjct 211749 GAGG 211752 >seq418 Length=67442 Score = 154 bits (170), Expect = 4e-32 Identities = 297/431 (69%), Gaps = 13/431 (3%) Strand=Plus/Plus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 ||| |||||||| ||| | |||||| | || ||||| ||||||||| | ||| Sbjct 11091 AAAACCATCCATTTCAACTAACAATTGATTCAAAGTAGTTTCCCGTTCATCATTAGCACC 11150 Query 288999 TCTTGAATCACC---CGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAA 289055 || | || ||| |||| |||| ||| ||||| |||||||||||| || | || Sbjct 11151 ACTGGCATTACCTTTCGAA-CGCTGCTT-----ACCAATAGCATCAATTTCATCGACAAA 11204 Query 289056 AATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCC 289115 | | | |||| ||||| | ||| | |||||| || | ||||| ||||| || Sbjct 11205 TACTATTGATGGAGCATTTTCACGGGCAGTCTTAAATAAATCACGAACACGAGATGCACC 11264 Query 289116 AAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACATTTG 289174 || ||| ||| ||||||| ||||| |||||| | ||||| |||| |||| ||||| | Sbjct 11265 AACACCTACAAACATTTCGACAAACTCAGAACCTGATAC-AGAATAAAATGGCACATTGG 11323 Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATA 289234 |||| || || ||| | || | ||| |||||||| || || ||||||||| ||| | Sbjct 11324 CTTCACCAGCAGTGGCCTTGGCAATAAGCGTCTTACCAGTACCTGGTGGTCCCGATAAGA 11383 Query 289235 GAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATT 289294 | | || ||| | ||| ||||| | ||||||||||| ||| || |||| Sbjct 11384 TAGCACCTCGTGGAATTTTAGCCCCTAATTTTTCGTATTTCTCAGGATTCTGCAAGAATT 11443 Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCA-TCACATCCTGCTACATCAGCAAAAGTA 289353 |||| |||| || ||| | ||| |||||| ||| | ||||| ||||| || || Sbjct 11444 TAACAAATTCCATAACTTCTTCTTTCGCCTCAGTCATA-CCTGCAACATCTTTGAATCTA 11502 Query 289354 ATATTAATATC 289364 || ||||| || Sbjct 11503 ATTTTAATGTC 11513 >seq212 Length=365203 Score = 134 bits (148), Expect = 4e-26 Identities = 236/343 (69%), Gaps = 3/343 (1%) Strand=Plus/Plus Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038 || |||||||| | || |||| ||| || ||||| | ||| |||||| | || Sbjct 168317 CCATGATTCTTTCTTATATCTATGAAATCAAAGATATCCGCATGCCATGGCTCTAAGTAA 168376 Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095 | ||||| || |||||| ||||| ||||| ||||| |||||||| || || Sbjct 168377 AGGGCAAAGGCGCCTGGTCTCTTGTTACCACCTTGATCGACATAACGAGCAGTGTTGTTA 168436 Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155 || |||| || ||||||||| |||||||| ||||| ||||| || || ||| | | | Sbjct 168437 AAAACACGTACCATAGGAATGATACCATTAGAAGTACCATTAGTACCAGCAATGTAAGCA 168496 Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215 |||| || |||| || || ||||||| ||||||||||| | | || ||||| Sbjct 168497 CCAGTAGAACGAATGTTGTGGATATGTAAACCAATACCACCAGCACTCTTGGAAATCAAG 168556 Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275 || ||| ||| | |||| | | ||||| || ||||| || |||| ||| | | | Sbjct 168557 GCACATGTCTTCAAGGTATCGTAGATACCATCGATAGAGTCTTCTTTCATAGCAACCAAG 168616 Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATA 156318 | || ||| | ||||| | || || ||||||||||||| Sbjct 168617 AAACAAGAAGACATCTGAGGGCTAGGAGTACCAGCGTTGAATA 168659 Score = 86.0 bits (94), Expect = 2e-11 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332 ||||| || |||||||||||||| | ||||||||| || | ||| | ||||||||| || Sbjct 22696 GCACCATGGGCAATCATACAATCTCTTTCCATTTCCCCGAAACGTAAACCACCATCTCTT 22755 Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392 || ||||| | || | ||| | |||||||| |||||| ||| | | || | Sbjct 22756 GATCTACCTTCAACAGGTTGTCTTGTTAAAACTTGAACTGGACCTCTAGCCCTAGCATGA 22815 Query 233393 ATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAATAGTTCT 233452 || || || | |||||||| | | ||| |||||| ||||||| |||| || Sbjct 22816 ATCTTGTCATCGACCATATGTCTTAATCTTTGGTAATAAGTTGGACCAAAGAATACTTGA 22875 Query 233453 GCGTGTAATTGTTCCCCAGATTCACCGCTGTATAAAACTTCA 233494 || ||||| | || | | ||| |||| | ||||||| Sbjct 22876 GCCATTAATTTCTTACCTGTATGACCATTGTACATAACTTCA 22917 Score = 84.2 bits (92), Expect = 6e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||| ||||| || | ||| || ||| || | ||||||||||| ||||| Sbjct 167968 GTATTCAACAATTTCACAACATAAGTTGGATGACTTAATAATACCTAAATTCTTTTGGTT 168027 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | ||| ||||||||||||| ||||||| ||| |||| || || || || | || || Sbjct 168028 TGTTTTTTTGTTACAAGCATCTTTGTATAACATGAATGGTGTACCAGTTTCAGTTTGAGC 168087 Query 155750 GTCCAGAAT 155758 || | ||| Sbjct 168088 ATCTAAAAT 168096 >seq381 Length=365744 Score = 123 bits (136), Expect = 7e-23 Identities = 202/291 (69%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||||||| || ||| || ||||| | | || | ||||||||| || |||||||| || Sbjct 47574 ATCATAATGAACCATTATATCTTCTAAAGCTTTAACTAAACGACGTTGGATATAACCTGT 47515 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | | ||||| ||||| |||||||| ||||| | | ||| |||||||||||||||| Sbjct 47514 TTCTGCAGTTTTAACAGCGGTATCAATAAGACCTTCTCTACCTGCCATAGCATGGAAGAA 47455 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | |||| || || || | | | ||||| | ||||||||||| | || || Sbjct 47454 AAATTCTTGTGGAGTTAAACCTCTCAAATAGGAGTTTTCAACGAAACCTTTAGATTCTGG 47395 Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACG 302792 |||| ||| ||||| ||||| |||| | | | || | ||| | || ||||| Sbjct 47394 AGAATAATCGTCTTTGGTGAAGTGGGGCAATGAACGATCAGCAAATCCGAAAGGAATACG 47335 Query 302793 CTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || |||||| |||| ||||| | || | | ||| || |||||||| Sbjct 47334 TTTACCTTCAACGATCTGTTGTCCTACACAAGCAGACATTTGAGAAATATT 47284 Score = 111 bits (122), Expect = 5e-19 Identities = 118/155 (76%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | || ||| |||||||| || || || |||||| | |||||| ||| Sbjct 48332 AGAATTTCCTTAAGACGAGGAACACCCAAAGTAACATT---CTTGGAAGAAACACCCGCA 48276 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 | ||||||||||||| ||| | |||||| | |||||||||||| ||| || |||||| Sbjct 48275 TAATGGAAAGTATTCAAAGTCATTTGAGTGGCTGGCTCACCAATTGATTGAGCTGCAATC 48216 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAATAGACTT 301967 | ||| |||||||| || || ||||| ||||| Sbjct 48215 ACACCCACCATTTCACCAGGATGAACAATGGACTT 48181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471809227197628